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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G03140   Tudor/PWWP/MBT superfamily protein 
 ath-r.7   AT3G03140   Tudor/PWWP/MBT superfamily protein 
 ath-e.2   AT3G03140   Tudor/PWWP/MBT superfamily protein 
 bra-r.6   103855134   uncharacterized protein At1g51745 
 bra-r.6   103844079   uncharacterized protein At1g51745 
 bna-r.1   125575198   uncharacterized protein At1g51745-like 
 bna-r.1   106435939   uncharacterized protein At1g51745 
 bna-r.1   106435787   uncharacterized protein At1g51745 
 ghi-r.1   107920354   uncharacterized protein At1g51745 
 ghi-r.1   107950570   uncharacterized protein At1g51745 
 ghi-r.1   107924777   uncharacterized protein At1g51745 
 cit-r.1   102606960   uncharacterized protein At1g51745 
 gma-u.5   102663865   uncharacterized protein At1g51745 
 gma-u.5   102666378   uncharacterized protein At1g51745 
 gma-u.5   102669790   uncharacterized protein At1g51745 
 vvi-u.5   100254467   uncharacterized protein At1g51745 
 ppo-u.5   7493903   uncharacterized protein At1g51745 
 ppo-u.5   7469838   uncharacterized protein At1g51745 
 mtr-u.5   11435530   uncharacterized LOC11435530 
 mtr-u.5   11442870   uncharacterized protein At1g51745 
 sly-u.5   101249899   uncharacterized protein At1g51745 
 sly-u.5   101261627   uncharacterized protein At1g51745 
 sot-r.1   102600914   uncharacterized protein At1g51745-like 
 sot-r.1   102603045   uncharacterized protein At1g51745 
 nta-r.1   107813816   uncharacterized protein At1g51745 
 nta-r.1   107823938   uncharacterized protein At1g51745 
 osa-u.5   9272272   uncharacterized protein At1g51745 
 osa-u.5   4330429   uncharacterized protein At1g51745 
 zma-u.5   103627591   Tudor/PWWP/MBT superfamily protein 
 zma-u.5   103653960   uncharacterized protein At1g51745 
 tae-r.2   123054460   uncharacterized protein At1g51745 
 tae-r.2   123128094   uncharacterized protein At1g51745 
 tae-r.2   123145179   uncharacterized protein At1g51745 
 hvu-r.1   123401314   uncharacterized protein At1g51745-like 
 hvu-r.1   123427755   uncharacterized LOC123427755 
 sbi-r.1   8073876   uncharacterized protein At1g51745 
 bdi-r.1   100840926   uncharacterized LOC100840926 
 bdi-r.1   100838564   uncharacterized protein At1g51745 

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Top 50 coexpressed genes to AT3G03140 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G03140 (ath-u.5 coexpression data)

CoexMap"821075"


athAT3G03140 | Entrez gene ID : 821075      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 3 1 3 1 2 2 2 2 2 2 2 3 2 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0097298 [list] [network] regulation of nucleus size  (4 genes)  IMP  
GO:0090351 [list] [network] seedling development  (137 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IMP  
GO CC
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0042393 [list] [network] histone binding  (50 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_186964.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_186964.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for NP_186964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G03140
ath-r.7
for
AT3G03140
ath-e.2
for
AT3G03140
bra-r.6
for
103855134
bra-r.6
for
103844079
bna-r.1
for
125575198
bna-r.1
for
106435939
bna-r.1
for
106435787
ghi-r.1
for
107920354
ghi-r.1
for
107950570
ghi-r.1
for
107924777
cit-r.1
for
102606960
gma-u.5
for
102663865
gma-u.5
for
102666378
gma-u.5
for
102669790
vvi-u.5
for
100254467
ppo-u.5
for
7493903
ppo-u.5
for
7469838
mtr-u.5
for
11435530
mtr-u.5
for
11442870
sly-u.5
for
101249899
sly-u.5
for
101261627
sot-r.1
for
102600914
sot-r.1
for
102603045
nta-r.1
for
107813816
nta-r.1
for
107823938
osa-u.5
for
9272272
osa-u.5
for
4330429
zma-u.5
for
103627591
zma-u.5
for
103653960
tae-r.2
for
123054460
tae-r.2
for
123128094
tae-r.2
for
123145179
hvu-r.1
for
123401314
hvu-r.1
for
123427755
sbi-r.1
for
8073876
bdi-r.1
for
100840926
bdi-r.1
for
100838564


Ortholog ID: 4550
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae tae hvu hvu sbi bdi bdi
Symbol AT3G03140 LOC103855134 LOC103844079 LOC125575198 LOC106435939 BNACNNG18390D LOC107920354 LOC107924777 LOC107912962 LOC102606960 LOC102663865 LOC102666378 LOC102669790 LOC100254467 LOC7493903 LOC7469838 LOC11435530 LOC11442870 LOC101249899 LOC101261627 LOC102600914 LOC102603045 LOC107813816 LOC107823938 LOC9272272 LOC4330429 LOC103627591 LOC103653960 LOC123128094 LOC123190323 LOC123137879 LOC123401314 LOC123427755 LOC8073876 LOC100840926 LOC100838564
Function* Tudor/PWWP/MBT superfamily protein uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745-like uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized LOC11435530 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745-like uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized protein At1g51745 Tudor/PWWP/MBT superfamily protein uncharacterized protein At1g51745 uncharacterized protein At1g51745 uncharacterized LOC123190323 uncharacterized protein At1g51745 uncharacterized protein At1g51745-like uncharacterized LOC123427755 uncharacterized protein At1g51745 uncharacterized LOC100840926 uncharacterized protein At1g51745
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03015 mRNA surveillance pathway 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821075 103855134 103844079 125575198 106435939 106432846 107920354 107924777 107912962 102606960 102663865 102666378 102669790 100254467 7493903 7469838 11435530 11442870 101249899 101261627 102600914 102603045 107813816 107823938 9272272 4330429 103627591 103653960 123128094 123190323 123137879 123401314 123427755 8073876 100840926 100838564
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