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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G19500   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-r.7   AT3G19500   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.9   AT3G19500   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-e.2   AT3G19500   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.bio   AT3G19500   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.hor   AT3G19500   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.lig   AT3G19500   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.str   AT3G19500   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.tis   AT3G19500   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100809317   transcription factor bHLH113 
 gma-u.5   100809107   transcription factor bHLH113 
 vvi-u.5   100249018   transcription factor bHLH113 
 mtr-u.5   25485380   transcription factor bHLH113 
 sly-u.5   101257027   transcription factor bHLH113 

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Top 50 coexpressed genes to AT3G19500 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G19500 (ath-u.5 coexpression data)

CoexMap"821484"


athAT3G19500 | Entrez gene ID : 821484      
Species ath gma vvi mtr sly nta bna ppo osa tae bdi sot bra sbi hvu cit zma cre ghi
Paralog 9 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA ISS TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IEA ISS  
Protein NP_001327696.1 [sequence] [blastp]
NP_001327697.1 [sequence] [blastp]
NP_566639.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001327696.1)
nucl 9,  cyto 1,  extr 1  (predict for NP_001327697.1)
nucl 9  (predict for NP_566639.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001327696.1)
other 8  (predict for NP_001327697.1)
other 8  (predict for NP_566639.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G19500

.
ath-r.7
for
AT3G19500

.
ath-m.9
for
AT3G19500

.
ath-e.2
for
AT3G19500

.
ath-m.4.bio
for
AT3G19500

.
ath-m.4.hor
for
AT3G19500

.
ath-m.4.lig
for
AT3G19500

.
ath-m.4.str
for
AT3G19500

.
ath-m.4.tis
for
AT3G19500

.
gma-u.5
for
100809317

.
gma-u.5
for
100809107

.
vvi-u.5
for
100249018

.
mtr-u.5
for
25485380

.
sly-u.5
for
101257027

.


Ortholog ID: 11682
Species ath gma gma sly bra vvi mtr ghi ghi bna cit
Symbol AT3G19500 LOC100809317 LOC100809107 LOC101257027 LOC103869450 LOC100249018 LOC25485380 LOC107894306 LOC107918903 LOC125609623 LOC102624532
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH113 transcription factor bHLH113 transcription factor bHLH113 transcription factor bHLH113 transcription factor bHLH113 transcription factor bHLH113 transcription factor bHLH113 transcription factor bHLH113 transcription factor bHLH113-like transcription factor bHLH113
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 8
ath00966 Glucosinolate biosynthesis 7
ath00290 Valine, leucine and isoleucine biosynthesis 3
ath00270 Cysteine and methionine metabolism 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
ghi04141 Protein processing in endoplasmic reticulum 3
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821484 100809317 100809107 101257027 103869450 100249018 25485380 107894306 107918903 125609623 102624532
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