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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-r.7   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.9   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-e.2   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.bio   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.hor   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.lig   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.str   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-m.4.tis   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 gma-u.5   100820290   protein SRG1 
 gma-u.5   100785152   protein SRG1 
 vvi-u.5   100263198   protein SRG1 
 ppo-u.5   7475370   protein SRG1 
 mtr-u.5   25488175   protein SRG1 
 sly-u.5   101266862   protein LATERAL BRANCHING OXIDOREDUCTASE 1 
 osa-u.5   4326792   protein LATERAL BRANCHING OXIDOREDUCTASE 1 
 zma-u.5   100280091   uncharacterized LOC100280091 

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Top 50 coexpressed genes to LBO1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LBO1 (ath-u.5 coexpression data)

CoexMap"821696"


athLBO1 | Entrez gene ID : 821696      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00906 [list] [network] Carotenoid biosynthesis (32 genes)
GO BP
GO:1901601 [list] [network] strigolactone biosynthetic process  (7 genes)  IGI  
GO:2000032 [list] [network] regulation of secondary shoot formation  (11 genes)  IMP  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_566685.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_566685.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_566685.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
LBO1

.
ath-r.7
for
LBO1

.
ath-m.9
for
LBO1

.
ath-e.2
for
LBO1

.
ath-m.4.bio
for
LBO1

.
ath-m.4.hor
for
LBO1

.
ath-m.4.lig
for
LBO1

.
ath-m.4.str
for
LBO1

.
ath-m.4.tis
for
LBO1

.
gma-u.5
for
100820290

.
gma-u.5
for
100785152

.
vvi-u.5
for
100263198

.
ppo-u.5
for
7475370

.
mtr-u.5
for
25488175

.
sly-u.5
for
101266862

.
osa-u.5
for
4326792

.
zma-u.5
for
100280091

.


Ortholog ID: 7589
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol LBO1 LOC100785152 LOC100820290 LOC101266862 LOC4326792 LOC100280091 LOC103835211 LOC103869174 LOC100263198 LOC7475370 LOC25488175 LOC123080479 LOC123072238 LOC123440801 LOC107916071 LOC107896707 LOC125608795 LOC106446003 LOC8081307 LOC102591514 LOC102625494 LOC100844860 LOC107818364 LOC107769042
Function* 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein SRG1 protein SRG1 protein LATERAL BRANCHING OXIDOREDUCTASE 1 protein LATERAL BRANCHING OXIDOREDUCTASE 1 uncharacterized LOC100280091 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1-like protein SRG1 protein SRG1 protein SRG1 protein SRG1 probable 2-oxoglutarate-dependent dioxygenase ANS protein LATERAL BRANCHING OXIDOREDUCTASE 1-like protein LATERAL BRANCHING OXIDOREDUCTASE 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00380 Tryptophan metabolism 4
gma00010 Glycolysis / Gluconeogenesis 3
gma00620 Pyruvate metabolism 3
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 4
gma01240 Biosynthesis of cofactors 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma01200 Carbon metabolism 3
gma00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00910 Nitrogen metabolism 4
nta01230 Biosynthesis of amino acids 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821696 100785152 100820290 101266862 4326792 100280091 103835211 103869174 100263198 7475370 25488175 123080479 123072238 123440801 107916071 107896707 125608795 106446003 8081307 102591514 102625494 100844860 107818364 107769042
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