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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RIN4   RPM1 interacting protein 4 
 ath-r.7   RIN4   RPM1 interacting protein 4 
 ath-m.9   RIN4   RPM1 interacting protein 4 
 ath-e.2   RIN4   RPM1 interacting protein 4 
 ath-m.4.bio   RIN4   RPM1 interacting protein 4 
 ath-m.4.hor   RIN4   RPM1 interacting protein 4 
 ath-m.4.lig   RIN4   RPM1 interacting protein 4 
 ath-m.4.str   RIN4   RPM1 interacting protein 4 
 ath-m.4.tis   RIN4   RPM1 interacting protein 4 
 bra-r.6   103860268   RPM1-interacting protein 4 
 bna-r.1   106447405   RPM1-interacting protein 4-like 
 bna-r.1   106379304   RPM1-interacting protein 4 
 bna-r.1   106361803   RPM1-interacting protein 4 
 ghi-r.1   107925937   RPM1-interacting protein 4 
 ghi-r.1   107962808   RPM1-interacting protein 4 
 ghi-r.1   107944972   RPM1-interacting protein 4 
 cit-r.1   102623408   RPM1-interacting protein 4-like 
 cit-r.1   102622529   RPM1-interacting protein 4-like 
 cit-r.1   102608817   RPM1-interacting protein 4 
 gma-u.5   RIN4d   RIN4d protein 
 gma-u.5   RIN4a   RIN4a protein 
 gma-u.5   RIN4c   RIN4c protein 
 vvi-u.5   100258114   RPM1-interacting protein 4 
 vvi-u.5   100255563   RPM1-interacting protein 4 
 ppo-u.5   7471157   RPM1-interacting protein 4 
 mtr-u.5   25498261   RPM1-interacting protein 4 
 mtr-u.5   25500328   RPM1-interacting protein 4 
 sly-u.5   101248708   RPM1-interacting protein 4 
 sly-u.5   101249560   RPM1-interacting protein 4 
 sly-u.5   101260623   RPM1-interacting protein 4 
 sot-r.1   102596147   RPM1-interacting protein 4 
 sot-r.1   102583531   RPM1-interacting protein 4-like 
 sot-r.1   102597433   RPM1-interacting protein 4-like 
 nta-r.1   107811869   RPM1-interacting protein 4 
 nta-r.1   107807092   RPM1-interacting protein 4-like 
 nta-r.1   107790422   RPM1-interacting protein 4 
 osa-u.5   4346097   RPM1-interacting protein 4 
 osa-u.5   4334782   RPM1-interacting protein 4 
 zma-u.5   100275697   uncharacterized LOC100275697 
 zma-u.5   100285658   nitrate-induced NOI protein 
 tae-r.2   123114317   RPM1-interacting protein 4 
 tae-r.2   123087618   RPM1-interacting protein 4 
 tae-r.2   123123803   RPM1-interacting protein 4 
 hvu-r.1   123395099   RPM1-interacting protein 4-like 
 hvu-r.1   123412764   RPM1-interacting protein 4-like 
 sbi-r.1   110437644   RPM1-interacting protein 4-like 
 sbi-r.1   8062409   RPM1-interacting protein 4 
 bdi-r.1   100831924   RPM1-interacting protein 4 
 bdi-r.1   100831447   RPM1-interacting protein 4 

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Top 50 coexpressed genes to RIN4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RIN4 (ath-u.5 coexpression data)

CoexMap""


athRIN4 | Entrez gene ID : 822098      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 3 3 3 2 1 2 3 3 3 2 2 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function RPM1 interacting protein 4
KEGG ath04626 [list] [network] Plant-pathogen interaction (216 genes)
GO BP
GO:0034051 [list] [network] negative regulation of plant-type hypersensitive response  (10 genes)  IMP  
GO:0002237 [list] [network] response to molecule of bacterial origin  (51 genes)  IMP  
GO:0009626 [list] [network] plant-type hypersensitive response  (54 genes)  IMP  
GO:0006955 [list] [network] immune response  (166 genes)  IGI  
GO:0006468 [list] [network] protein phosphorylation  (345 genes)  IDA  
GO:0042742 [list] [network] defense response to bacterium  (363 genes)  IMP  
GO CC
GO:0019897 [list] [network] extrinsic component of plasma membrane  (8 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA IDA TAS  
GO:0016020 [list] [network] membrane  (3740 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001325873.1 [sequence] [blastp]
NP_189143.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  extr 1,  vacu 1  (predict for NP_001325873.1)
nucl 10  (predict for NP_189143.2)
Subcellular
localization
TargetP
mito 6  (predict for NP_001325873.1)
other 7  (predict for NP_189143.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RIN4
ath-r.7
for
RIN4
ath-m.9
for
RIN4
ath-e.2
for
RIN4
ath-m.4.bio
for
RIN4
ath-m.4.hor
for
RIN4
ath-m.4.lig
for
RIN4
ath-m.4.str
for
RIN4
ath-m.4.tis
for
RIN4
bra-r.6
for
103860268
bna-r.1
for
106447405
bna-r.1
for
106379304
bna-r.1
for
106361803
ghi-r.1
for
107925937
ghi-r.1
for
107962808
ghi-r.1
for
107944972
cit-r.1
for
102623408
cit-r.1
for
102622529
cit-r.1
for
102608817
gma-u.5
for
RIN4d
gma-u.5
for
RIN4a
gma-u.5
for
RIN4c
vvi-u.5
for
100258114
vvi-u.5
for
100255563
ppo-u.5
for
7471157
mtr-u.5
for
25498261
mtr-u.5
for
25500328
sly-u.5
for
101248708
sly-u.5
for
101249560
sly-u.5
for
101260623
sot-r.1
for
102596147
sot-r.1
for
102583531
sot-r.1
for
102597433
nta-r.1
for
107811869
nta-r.1
for
107807092
nta-r.1
for
107790422
osa-u.5
for
4346097
osa-u.5
for
4334782
zma-u.5
for
100275697
zma-u.5
for
100285658
tae-r.2
for
123114317
tae-r.2
for
123087618
tae-r.2
for
123123803
hvu-r.1
for
123395099
hvu-r.1
for
123412764
sbi-r.1
for
110437644
sbi-r.1
for
8062409
bdi-r.1
for
100831924
bdi-r.1
for
100831447

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Ortholog ID: 3464
Species ath bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol RIN4 LOC103860268 LOC106447405 LOC106379304 LOC106361803 LOC107925937 LOC107944972 LOC107938993 LOC102623408 LOC102622529 LOC102624283 RIN4d RIN4a RIN4c LOC100258114 LOC100255563 LOC7471157 LOC25498261 LOC25500328 LOC101248708 LOC101249560 LOC101260623 LOC102596147 LOC102583531 LOC102597433 LOC107811869 LOC107807092 LOC107790422 LOC4346097 LOC4334782 LOC100275697 LOC100285658 LOC123114317 LOC123087618 LOC123151957 LOC123395099 LOC123412764 LOC110437644 LOC8062409 LOC100831924 LOC100831447
Function* RPM1 interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4-like RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4-like RPM1-interacting protein 4-like RPM1-interacting protein 4-like RIN4d protein RIN4a protein RIN4c protein RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4-like RPM1-interacting protein 4-like RPM1-interacting protein 4 RPM1-interacting protein 4-like RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 uncharacterized LOC100275697 nitrate-induced NOI protein RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4-like RPM1-interacting protein 4-like RPM1-interacting protein 4-like RPM1-interacting protein 4 RPM1-interacting protein 4 RPM1-interacting protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi03272 Virion - Hepatitis viruses 4
ghi04130 SNARE interactions in vesicular transport 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
vvi04626 Plant-pathogen interaction 4
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 5
vvi04626 Plant-pathogen interaction 5
vvi04145 Phagosome 2
vvi00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 3
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
mtr04148 Efferocytosis 2
mtr00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 3
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly04145 Phagosome 3
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 4
sot00190 Oxidative phosphorylation 3
sot00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
sot04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00360 Phenylalanine metabolism 3
zma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 7
tae04144 Endocytosis 6
tae05100 Bacterial invasion of epithelial cells 6
tae03010 Ribosome 5
tae00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 4
hvu04075 Plant hormone signal transduction 2
hvu00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
bdi04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822098 103860268 106447405 106379304 106361803 107925937 107944972 107938993 102623408 102622529 102624283 100499220 100499218 100499219 100258114 100255563 7471157 25498261 25500328 101248708 101249560 101260623 102596147 102583531 102597433 107811869 107807092 107790422 4346097 4334782 100275697 100285658 123114317 123087618 123151957 123395099 123412764 110437644 8062409 100831924 100831447
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