Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G25680   SLH domain protein 
 ath-r.7   AT3G25680   SLH domain protein 
 ath-m.9   AT3G25680   SLH domain protein 
 ath-e.2   AT3G25680   SLH domain protein 
 ath-m.4.bio   AT3G25680   SLH domain protein 
 ath-m.4.hor   AT3G25680   SLH domain protein 
 ath-m.4.lig   AT3G25680   SLH domain protein 
 ath-m.4.str   AT3G25680   SLH domain protein 
 ath-m.4.tis   AT3G25680   SLH domain protein 
 bra-r.6   103839366   uncharacterized LOC103839366 
 bna-r.1   106416500   uncharacterized LOC106416500 
 bna-r.1   106437954   uncharacterized LOC106437954 
 ghi-r.1   107946457   uncharacterized LOC107946457 
 ghi-r.1   107934788   uncharacterized LOC107934788 
 cit-r.1   102618545   uncharacterized LOC102618545 
 gma-u.5   100813930   uncharacterized LOC100813930 
 gma-u.5   100803220   uncharacterized LOC100803220 
 vvi-u.5   100259365   uncharacterized LOC100259365 
 ppo-u.5   7466925   uncharacterized LOC7466925 
 mtr-u.5   11431645   uncharacterized LOC11431645 
 sly-u.5   101268278   uncharacterized LOC101268278 
 sot-r.1   102580691   uncharacterized LOC102580691 
 nta-r.1   107823872   uncharacterized LOC107823872 
 nta-r.1   107778514   uncharacterized LOC107778514 
 osa-u.5   4341109   uncharacterized LOC4341109 
 zma-u.5   103630012   uncharacterized LOC103630012 
 zma-u.5   100277914   uncharacterized LOC100277914 
 tae-r.2   123165007   uncharacterized LOC123165007 
 tae-r.2   123157171   uncharacterized LOC123157171 
 tae-r.2   123150648   uncharacterized LOC123150648 
 hvu-r.1   123412990   uncharacterized LOC123412990 
 sbi-r.1   8072916   uncharacterized LOC8072916 
 bdi-r.1   100834778   uncharacterized LOC100834778 

close


Top 50 coexpressed genes to AT3G25680 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G25680 (ath-u.5 coexpression data)

CoexMap"822156"


athAT3G25680 | Entrez gene ID : 822156      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
Protein NP_566775.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for NP_566775.2)
Subcellular
localization
TargetP
chlo 4  (predict for NP_566775.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G25680
ath-r.7
for
AT3G25680
ath-m.9
for
AT3G25680
ath-e.2
for
AT3G25680
ath-m.4.bio
for
AT3G25680
ath-m.4.hor
for
AT3G25680
ath-m.4.lig
for
AT3G25680
ath-m.4.str
for
AT3G25680
ath-m.4.tis
for
AT3G25680
bra-r.6
for
103839366
bna-r.1
for
106416500
bna-r.1
for
106437954
ghi-r.1
for
107946457
ghi-r.1
for
107934788
cit-r.1
for
102618545
gma-u.5
for
100813930
gma-u.5
for
100803220
vvi-u.5
for
100259365
ppo-u.5
for
7466925
mtr-u.5
for
11431645
sly-u.5
for
101268278
sot-r.1
for
102580691
nta-r.1
for
107823872
nta-r.1
for
107778514
osa-u.5
for
4341109
zma-u.5
for
103630012
zma-u.5
for
100277914
tae-r.2
for
123165007
tae-r.2
for
123157171
tae-r.2
for
123150648
hvu-r.1
for
123412990
sbi-r.1
for
8072916
bdi-r.1
for
100834778


Ortholog ID: 10112
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol AT3G25680 LOC103839366 LOC106416500 LOC106437954 LOC107946457 LOC107934788 LOC102618545 LOC100813930 LOC100803220 LOC100259365 LOC7466925 LOC11431645 LOC101268278 LOC102580691 LOC107823872 LOC107778514 LOC4341109 LOC103630012 LOC100277914 LOC123165007 LOC123157171 LOC123150648 LOC123412990 LOC8072916 LOC100834778
Function* SLH domain protein uncharacterized LOC103839366 uncharacterized LOC106416500 uncharacterized LOC106437954 uncharacterized LOC107946457 uncharacterized LOC107934788 uncharacterized LOC102618545 uncharacterized LOC100813930 uncharacterized LOC100803220 uncharacterized LOC100259365 uncharacterized LOC7466925 uncharacterized LOC11431645 uncharacterized LOC101268278 uncharacterized LOC102580691 uncharacterized LOC107823872 uncharacterized LOC107778514 uncharacterized LOC4341109 uncharacterized LOC103630012 uncharacterized LOC100277914 uncharacterized LOC123165007 uncharacterized LOC123157171 uncharacterized LOC123150648 uncharacterized LOC123412990 uncharacterized LOC8072916 uncharacterized LOC100834778
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna00920 Sulfur metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 3
vvi03050 Proteasome 2
vvi00230 Purine metabolism 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 6
sly01200 Carbon metabolism 6
sly00010 Glycolysis / Gluconeogenesis 4
sly00020 Citrate cycle (TCA cycle) 4
sly00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 5
osa03410 Base excision repair 2
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
zma00860 Porphyrin metabolism 2
zma01240 Biosynthesis of cofactors 2
zma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00480 Glutathione metabolism 3
tae01200 Carbon metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi00190 Oxidative phosphorylation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822156 103839366 106416500 106437954 107946457 107934788 102618545 100813930 100803220 100259365 7466925 11431645 101268278 102580691 107823872 107778514 4341109 103630012 100277914 123165007 123157171 123150648 123412990 8072916 100834778
The preparation time of this page was 0.1 [sec].