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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G25750   F-box SKIP23-like protein (DUF295) 
 ath-m.4.bio   AT3G25750   F-box SKIP23-like protein (DUF295) 
 ath-m.4.hor   AT3G25750   F-box SKIP23-like protein (DUF295) 
 ath-m.4.lig   AT3G25750   F-box SKIP23-like protein (DUF295) 
 ath-m.4.str   AT3G25750   F-box SKIP23-like protein (DUF295) 
 ath-m.4.tis   AT3G25750   F-box SKIP23-like protein (DUF295) 
 bna-r.1   106349964   putative F-box protein At2g16290 
 ghi-r.1   107944986   F-box protein SKIP23 
 ghi-r.1   107898543   F-box protein SKIP23 
 ghi-r.1   107898544   F-box protein SKIP23 
 cit-r.1   102629892   F-box protein SKIP23 
 gma-u.5   102666149   F-box protein At2g26160 
 gma-u.5   100781685   F-box protein SKIP23 
 vvi-u.5   100265942   F-box protein SKIP23 
 vvi-u.5   100255655   F-box protein SKIP23-like 
 vvi-u.5   100248766   F-box protein SKIP23 
 ppo-u.5   7474974   F-box protein SKIP23 
 ppo-u.5   18099111   putative F-box protein At1g65770 
 mtr-u.5   25495620   F-box protein At2g17036 
 mtr-u.5   25499245   F-box protein At4g35733 
 sly-u.5   101249500   F-box protein SKIP23 
 sly-u.5   101249419   F-box protein SKIP23 
 sot-r.1   102601273   F-box protein SKIP23-like 
 sot-r.1   102578619   F-box protein SKIP23-like 
 nta-r.1   107791639   F-box protein SKIP23 
 nta-r.1   107826340   F-box protein SKIP23-like 

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Top 50 coexpressed genes to AT3G25750 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G25750 (ath-m.9 coexpression data)

CoexMap"822166"


athAT3G25750 | Entrez gene ID : 822166      
Species ath bna ghi cit gma vvi ppo mtr sly sot nta bra zma cre sbi tae osa hvu bdi
Paralog 6 1 3 1 2 3 2 2 2 2 2 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001325458.1 [sequence] [blastp]
NP_189203.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for NP_001325458.1)
nucl 5,  cyto 4  (predict for NP_189203.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001325458.1)
other 9  (predict for NP_189203.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G25750
ath-m.4.bio
for
AT3G25750
ath-m.4.hor
for
AT3G25750
ath-m.4.lig
for
AT3G25750
ath-m.4.str
for
AT3G25750
ath-m.4.tis
for
AT3G25750
bna-r.1
for
106349964
ghi-r.1
for
107944986
ghi-r.1
for
107898543
ghi-r.1
for
107898544
cit-r.1
for
102629892
gma-u.5
for
102666149
gma-u.5
for
100781685
vvi-u.5
for
100265942
vvi-u.5
for
100255655
vvi-u.5
for
100248766
ppo-u.5
for
7474974
ppo-u.5
for
18099111
mtr-u.5
for
25495620
mtr-u.5
for
25499245
sly-u.5
for
101249500
sly-u.5
for
101249419
sot-r.1
for
102601273
sot-r.1
for
102578619
nta-r.1
for
107791639
nta-r.1
for
107826340


Ortholog ID: 260
Species ath bra bra bna ghi ghi ghi cit gma gma vvi vvi vvi ppo ppo sly sly sot nta nta
Symbol AT1G64840 LOC103864581 LOC103864580 LOC106352396 LOC107944986 LOC107908638 LOC107937847 LOC102629892 LOC102666149 LOC100781685 LOC100255655 LOC100248766 LOC104878343 LOC7474974 LOC7496779 LOC101249419 LOC101266597 LOC102601273 LOC107791639 LOC107826340
Function* LOW protein: F-box/kelch-repeat protein (DUF295) F-box/kelch-repeat protein At1g64840 F-box/kelch-repeat protein At1g64840 F-box/kelch-repeat protein At1g64840-like F-box protein SKIP23 F-box protein SKIP23 F-box protein SKIP23 F-box protein SKIP23 F-box protein At2g26160 F-box protein SKIP23 F-box protein SKIP23-like F-box protein SKIP23 F-box protein SKIP23-like F-box protein SKIP23 F-box protein SKIP23 F-box protein SKIP23 F-box protein SKIP23-like F-box protein SKIP23-like F-box protein SKIP23 F-box protein SKIP23-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 2
bra00513 Various types of N-glycan biosynthesis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 8
ppo04145 Phagosome 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842792 103864581 103864580 106352396 107944986 107908638 107937847 102629892 102666149 100781685 100255655 100248766 104878343 7474974 7496779 101249419 101266597 102601273 107791639 107826340
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