Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TCP20   TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 
 ath-r.7   TCP20   TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 
 ath-m.9   TCP20   TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 
 ath-e.2   TCP20   TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 
 ath-m.4.bio   TCP20   TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 
 ath-m.4.hor   TCP20   TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 
 ath-m.4.lig   TCP20   TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 
 ath-m.4.str   TCP20   TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 
 ath-m.4.tis   TCP20   TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 
 gma-u.5   100800779   transcription factor TCP20-like 
 gma-u.5   100778951   transcription factor TCP20 
 vvi-u.5   100253170   transcription factor TCP20 
 ppo-u.5   18107224   transcription factor TCP20 
 ppo-u.5   7496557   transcription factor TCP20 
 ppo-u.5   7495798   transcription factor TCP20 
 mtr-u.5   11439813   transcription factor TCP20 
 sly-u.5   100736459   transcription factor TCP18-like 
 osa-u.5   4327261   transcription factor TCP20 
 zma-u.5   100274570   uncharacterized LOC100274570 
 zma-u.5   100272415   uncharacterized LOC100272415 

close


Top 50 coexpressed genes to TCP20 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to TCP20 (ath-u.5 coexpression data)

CoexMap"822318"


athTCP20 | Entrez gene ID : 822318      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1900056 [list] [network] negative regulation of leaf senescence  (22 genes)  IGI  
GO:0008361 [list] [network] regulation of cell size  (26 genes)  IGI  
GO:0009653 [list] [network] anatomical structure morphogenesis  (987 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000987 [list] [network] cis-regulatory region sequence-specific DNA binding  (55 genes)  IDA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IDA ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001327814.1 [sequence] [blastp]
NP_189337.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  pero 2  (predict for NP_001327814.1)
nucl 7,  cyto_nucl 4,  pero 2  (predict for NP_189337.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001327814.1)
other 7  (predict for NP_189337.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
TCP20

.
ath-r.7
for
TCP20

.
ath-m.9
for
TCP20

.
ath-e.2
for
TCP20

.
ath-m.4.bio
for
TCP20

.
ath-m.4.hor
for
TCP20

.
ath-m.4.lig
for
TCP20

.
ath-m.4.str
for
TCP20

.
ath-m.4.tis
for
TCP20

.
gma-u.5
for
100800779

.
gma-u.5
for
100778951

.
vvi-u.5
for
100253170

.
ppo-u.5
for
18107224

.
ppo-u.5
for
7496557

.
ppo-u.5
for
7495798

.
mtr-u.5
for
11439813

.
sly-u.5
for
100736459

.
osa-u.5
for
4327261

.
zma-u.5
for
100274570

.
zma-u.5
for
100272415

.


Ortholog ID: 3937
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol TCP20 LOC100800779 LOC100778951 LOC100736459 LOC4327261 LOC100272415 LOC100274570 LOC103836975 LOC100253170 LOC18107224 LOC7496557 LOC11439813 LOC123072055 LOC123063147 LOC123445274 LOC121221139 LOC107914010 LOC106376970 LOC106413990 LOC8059375 LOC102584493 LOC102586089 LOC102624796 LOC102618103 LOC100827968 LOC107787814 LOC107795420
Function* TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 transcription factor TCP20-like transcription factor TCP20 transcription factor TCP18-like transcription factor TCP20 uncharacterized LOC100272415 uncharacterized LOC100274570 transcription factor TCP20 transcription factor TCP20 transcription factor TCP20 transcription factor TCP20 transcription factor TCP20 transcription factor TCP20 transcription factor TCP20 transcription factor TCP20-like transcription factor TCP20 transcription factor TCP20 transcription factor TCP20-like transcription factor TCP20-like transcription factor TCP20 transcription factor TCP20-like transcription factor TCP20 transcription factor TCP20-like transcription factor TCP20 transcription factor TCP20 transcription factor TCP20 transcription factor TCP20-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04130 SNARE interactions in vesicular transport 3
gma03083 Polycomb repressive complex 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04130 SNARE interactions in vesicular transport 2
gma04144 Endocytosis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822318 100800779 100778951 100736459 4327261 100272415 100274570 103836975 100253170 18107224 7496557 11439813 123072055 123063147 123445274 121221139 107914010 106376970 106413990 8059375 102584493 102586089 102624796 102618103 100827968 107787814 107795420
The preparation time of this page was 0.1 [sec].