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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GC6   golgin Putative 6 
 ath-r.7   GC6   golgin Putative 6 
 ath-m.9   GC6   golgin Putative 6 
 ath-e.2   GC6   golgin Putative 6 
 ath-m.4.bio   GC6   golgin Putative 6 
 ath-m.4.hor   GC6   golgin Putative 6 
 ath-m.4.lig   GC6   golgin Putative 6 
 ath-m.4.str   GC6   golgin Putative 6 
 ath-m.4.tis   GC6   golgin Putative 6 
 gma-u.5   100793920   golgin candidate 6 
 gma-u.5   100785792   golgin candidate 6 
 vvi-u.5   100266995   golgin candidate 6 
 ppo-u.5   7467647   golgin candidate 6 
 mtr-u.5   25495117   golgin candidate 6 
 sly-u.5   101261780   golgin candidate 6-like 
 sly-u.5   101249393   golgin candidate 6 
 osa-u.5   4352428   golgin candidate 6 
 zma-u.5   100273672   uncharacterized LOC100273672 
 zma-u.5   103640962   golgin candidate 6 

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Top 50 coexpressed genes to GC6 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GC6 (ath-u.5 coexpression data)

CoexMap"822375"


athGC6 | Entrez gene ID : 822375      
Species ath gma vvi ppo mtr sly osa zma nta bna tae bdi sot bra sbi hvu cit cre ghi
Paralog 9 2 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032527 [list] [network] protein exit from endoplasmic reticulum  (6 genes)  IMP  
GO:0009791 [list] [network] post-embryonic development  (1579 genes)  IMP  
GO CC
GO:0000139 [list] [network] Golgi membrane  (38 genes)  IEA  
GO:0005795 [list] [network] Golgi stack  (193 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IEA  
GO MF
Protein NP_566820.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cysk_nucl 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_566820.1)
Subcellular
localization
TargetP
other 6  (predict for NP_566820.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GC6

.
ath-r.7
for
GC6

.
ath-m.9
for
GC6

.
ath-e.2
for
GC6

.
ath-m.4.bio
for
GC6

.
ath-m.4.hor
for
GC6

.
ath-m.4.lig
for
GC6

.
ath-m.4.str
for
GC6

.
ath-m.4.tis
for
GC6

.
gma-u.5
for
100793920

.
gma-u.5
for
100785792

.
vvi-u.5
for
100266995

.
ppo-u.5
for
7467647

.
mtr-u.5
for
25495117

.
sly-u.5
for
101261780

.
sly-u.5
for
101249393

.
osa-u.5
for
4352428

.
zma-u.5
for
100273672

.
zma-u.5
for
103640962

.


Ortholog ID: 6886
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol GC6 LOC100793920 LOC100785792 LOC101249393 LOC4352428 LOC100273672 LOC103640962 LOC103875209 LOC103854227 LOC100266995 LOC7467647 LOC25495117 LOC123110814 LOC123102630 LOC123395601 LOC107926045 LOC107897897 LOC106401792 LOC106382129 CHLRE_06g271950v5 LOC8066305 LOC102587239 LOC102612836 LOC100832173 LOC107806804 LOC107824297
Function* golgin Putative 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 uncharacterized LOC100273672 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6-like golgin candidate 6 uncharacterized protein golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6 golgin candidate 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00350 Tyrosine metabolism 3
bra00280 Valine, leucine and isoleucine degradation 2
bra00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 2
tae00592 alpha-Linolenic acid metabolism 2
tae01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 6
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822375 100793920 100785792 101249393 4352428 100273672 103640962 103875209 103854227 100266995 7467647 25495117 123110814 123102630 123395601 107926045 107897897 106401792 106382129 5721824 8066305 102587239 102612836 100832173 107806804 107824297
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