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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G28540   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-r.7   AT3G28540   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.9   AT3G28540   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-e.2   AT3G28540   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.bio   AT3G28540   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.hor   AT3G28540   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.lig   AT3G28540   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.str   AT3G28540   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.tis   AT3G28540   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT3G28510   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AATP1   AAA-ATPase 1 
 ath-u.5   AT5G40000   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100813126   AAA-ATPase ASD, mitochondrial 
 gma-u.5   100798981   AAA-ATPase At3g28580 
 vvi-u.5   109121427   AAA-ATPase At3g28580 
 ppo-u.5   7487192   AAA-ATPase ASD, mitochondrial 
 mtr-u.5   11441129   AAA-ATPase At3g28510 
 mtr-u.5   25482136   AAA-ATPase At3g28510 
 mtr-u.5   11421813   AAA-ATPase ASD, mitochondrial 
 sly-u.5   101247583   AAA-ATPase At3g28510-like 
 sly-u.5   101247884   AAA-ATPase At3g28510-like 
 sly-u.5   101247288   AAA-ATPase At3g28600-like 
 osa-u.5   4342631   AAA-ATPase ASD, mitochondrial 
 osa-u.5   4352116   AAA-ATPase ASD, mitochondrial 
 zma-u.5   100281142   uncharacterized LOC100281142 
 zma-u.5   100281734   ATPase 3 
 zma-u.5   100383595   AAA-ATPase ASD mitochondrial 

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Top 50 coexpressed genes to AT3G28540 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G28540 (ath-u.5 coexpression data)

CoexMap"822484"


athAT3G28540 | Entrez gene ID : 822484      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 12 2 1 1 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001030789.1 [sequence] [blastp]
NP_189495.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 3  (predict for NP_001030789.1)
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for NP_189495.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001030789.1)
other 5,  mito 4  (predict for NP_189495.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G28540
ath-r.7
for
AT3G28540
ath-m.9
for
AT3G28540
ath-e.2
for
AT3G28540
ath-m.4.bio
for
AT3G28540
ath-m.4.hor
for
AT3G28540
ath-m.4.lig
for
AT3G28540
ath-m.4.str
for
AT3G28540
ath-m.4.tis
for
AT3G28540
ath-u.5
for
AT3G28510
ath-u.5
for
AATP1
ath-u.5
for
AT5G40000
gma-u.5
for
100813126
gma-u.5
for
100798981
vvi-u.5
for
109121427
ppo-u.5
for
7487192
mtr-u.5
for
11441129
mtr-u.5
for
25482136
mtr-u.5
for
11421813
sly-u.5
for
101247583
sly-u.5
for
101247884
sly-u.5
for
101247288
osa-u.5
for
4342631
osa-u.5
for
4352116
zma-u.5
for
100281142
zma-u.5
for
100281734
zma-u.5
for
100383595


Ortholog ID: 341
Species ath ath bra bna bna ghi ghi cit cit gma vvi mtr mtr sly sly sot sot nta nta osa osa zma zma hvu hvu sbi sbi bdi bdi
Symbol AT5G40000 AATP1 LOC103873807 LOC125575941 LOC106412567 LOC121209608 LOC107923266 LOC102614646 LOC102614176 LOC100798981 LOC100242191 LOC11407637 LOC25493792 LOC101264174 LOC101247288 LOC102605122 LOC102578794 LOC107809561 LOC107783715 LOC4342631 LOC4352116 LOC100281142 LOC100383595 LOC123395351 LOC123442486 LOC8075076 LOC8072880 LOC100830055 LOC100841076
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein AAA-ATPase 1 AAA-ATPase ASD, mitochondrial AAA-ATPase At3g28510-like AAA-ATPase At3g28600-like AAA-ATPase ASD, mitochondrial AAA-ATPase ASD, mitochondrial AAA-ATPase ASD, mitochondrial-like AAA-ATPase ASD, mitochondrial-like AAA-ATPase At3g28580 AAA-ATPase At3g28580 AAA-ATPase ASD, mitochondrial AAA-ATPase ASD, mitochondrial probable choline kinase 2 AAA-ATPase At3g28600-like AAA-ATPase At3g28510-like AAA-ATPase At3g28580-like AAA-ATPase At3g28610-like AAA-ATPase At3g28510-like AAA-ATPase ASD, mitochondrial AAA-ATPase ASD, mitochondrial uncharacterized LOC100281142 AAA-ATPase ASD mitochondrial AAA-ATPase At3g28580-like AAA-ATPase ASD, mitochondrial-like AAA-ATPase ASD, mitochondrial AAA-ATPase ASD, mitochondrial AAA-ATPase ASD, mitochondrial AAA-ATPase ASD, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
bdi01230 Biosynthesis of amino acids 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833997 833998 103873807 125575941 106412567 121209608 107923266 102614646 102614176 100798981 100242191 11407637 25493792 101264174 101247288 102605122 102578794 107809561 107783715 4342631 4352116 100281142 100383595 123395351 123442486 8075076 8072880 100830055 100841076
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