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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G28720   uncharacterized protein 
 ath-r.7   AT3G28720   uncharacterized protein 
 ath-m.9   AT3G28720   uncharacterized protein 
 ath-e.2   AT3G28720   uncharacterized protein 
 ath-m.4.bio   AT3G28720   uncharacterized protein 
 ath-m.4.hor   AT3G28720   uncharacterized protein 
 ath-m.4.lig   AT3G28720   uncharacterized protein 
 ath-m.4.str   AT3G28720   uncharacterized protein 
 ath-m.4.tis   AT3G28720   uncharacterized protein 
 bra-r.6   103875136   uncharacterized LOC103875136 
 bna-r.1   106349161   uncharacterized LOC106349161 
 bna-r.1   106391412   uncharacterized LOC106391412 
 ghi-r.1   107892335   uncharacterized LOC107892335 
 ghi-r.1   107892368   uncharacterized LOC107892368 
 cit-r.1   102622976   uncharacterized LOC102622976 
 gma-u.5   100819881   uncharacterized LOC100819881 
 gma-u.5   100818221   uncharacterized LOC100818221 
 vvi-u.5   100249048   uncharacterized LOC100249048 
 ppo-u.5   7482453   uncharacterized LOC7482453 
 ppo-u.5   7472608   uncharacterized LOC7472608 
 mtr-u.5   25495282   uncharacterized LOC25495282 
 sly-u.5   101259498   uncharacterized LOC101259498 
 sot-r.1   102593974   uncharacterized LOC102593974 
 nta-r.1   107774393   uncharacterized LOC107774393 
 nta-r.1   107759589   uncharacterized LOC107759589 
 osa-u.5   4341393   uncharacterized LOC4341393 
 zma-u.5   100279525   uncharacterized LOC100279525 
 tae-r.2   123156882   uncharacterized LOC123156882 
 tae-r.2   123148080   uncharacterized LOC123148080 
 tae-r.2   123165134   uncharacterized LOC123165134 
 hvu-r.1   123407620   uncharacterized LOC123407620 
 sbi-r.1   8079321   uncharacterized LOC8079321 
 bdi-r.1   100821666   uncharacterized LOC100821666 
 cre-r.1   CHLRE_02g081650v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G28720 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G28720 (ath-u.5 coexpression data)

CoexMap"822504"


athAT3G28720 | Entrez gene ID : 822504      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001326785.1 [sequence] [blastp]
NP_189514.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001326785.1)
chlo 4,  plas 2,  vacu 2,  E.R. 1,  nucl_plas 1  (predict for NP_189514.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001326785.1)
other 3  (predict for NP_189514.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G28720
ath-r.7
for
AT3G28720
ath-m.9
for
AT3G28720
ath-e.2
for
AT3G28720
ath-m.4.bio
for
AT3G28720
ath-m.4.hor
for
AT3G28720
ath-m.4.lig
for
AT3G28720
ath-m.4.str
for
AT3G28720
ath-m.4.tis
for
AT3G28720
bra-r.6
for
103875136
bna-r.1
for
106349161
bna-r.1
for
106391412
ghi-r.1
for
107892335
ghi-r.1
for
107892368
cit-r.1
for
102622976
gma-u.5
for
100819881
gma-u.5
for
100818221
vvi-u.5
for
100249048
ppo-u.5
for
7482453
ppo-u.5
for
7472608
mtr-u.5
for
25495282
sly-u.5
for
101259498
sot-r.1
for
102593974
nta-r.1
for
107774393
nta-r.1
for
107759589
osa-u.5
for
4341393
zma-u.5
for
100279525
tae-r.2
for
123156882
tae-r.2
for
123148080
tae-r.2
for
123165134
hvu-r.1
for
123407620
sbi-r.1
for
8079321
bdi-r.1
for
100821666
cre-r.1
for
CHLRE_02g081650v5


Ortholog ID: 9516
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT3G28720 LOC103875136 LOC106349161 LOC106391412 LOC107892335 LOC107892368 LOC102622976 LOC100819881 LOC100818221 LOC100249048 LOC7482453 LOC7472608 LOC25495282 LOC101259498 LOC102593974 LOC107774393 LOC107759589 LOC4341393 LOC100279525 LOC123156882 LOC123148080 LOC123165134 LOC123407620 LOC8079321 LOC100821666 CHLRE_02g081650v5
Function* uncharacterized protein uncharacterized LOC103875136 uncharacterized LOC106349161 uncharacterized LOC106391412 uncharacterized LOC107892335 uncharacterized LOC107892368 uncharacterized LOC102622976 uncharacterized LOC100819881 uncharacterized LOC100818221 uncharacterized LOC100249048 uncharacterized LOC7482453 uncharacterized LOC7472608 uncharacterized LOC25495282 uncharacterized LOC101259498 uncharacterized LOC102593974 uncharacterized LOC107774393 uncharacterized LOC107759589 uncharacterized LOC4341393 uncharacterized LOC100279525 uncharacterized LOC123156882 uncharacterized LOC123148080 uncharacterized LOC123165134 uncharacterized LOC123407620 uncharacterized LOC8079321 uncharacterized LOC100821666 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna04382 Cornified envelope formation 2
bna04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
bna00600 Sphingolipid metabolism 2
bna04382 Cornified envelope formation 2
bna04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 8
ghi04141 Protein processing in endoplasmic reticulum 8
ghi00513 Various types of N-glycan biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 8
ghi04141 Protein processing in endoplasmic reticulum 8
ghi00513 Various types of N-glycan biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo00510 N-Glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly00513 Various types of N-glycan biosynthesis 2
sly04144 Endocytosis 2
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta04141 Protein processing in endoplasmic reticulum 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta04142 Lysosome 2
nta04144 Endocytosis 2
nta05100 Bacterial invasion of epithelial cells 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa00510 N-Glycan biosynthesis 3
osa00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00514 Other types of O-glycan biosynthesis 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822504 103875136 106349161 106391412 107892335 107892368 102622976 100819881 100818221 100249048 7482453 7472608 25495282 101259498 102593974 107774393 107759589 4341393 100279525 123156882 123148080 123165134 123407620 8079321 100821666 5727314
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