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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G29410   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-r.7   AT3G29410   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-m.9   AT3G29410   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-e.2   AT3G29410   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-m.4.bio   AT3G29410   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-m.4.hor   AT3G29410   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-m.4.lig   AT3G29410   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-m.4.str   AT3G29410   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-m.4.tis   AT3G29410   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-u.5   AT1G33750   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 bra-r.6   103874257   alpha-humulene/(-)-(E)-beta-caryophyllene synthase 
 bra-r.6   103874801   alpha-humulene/(-)-(E)-beta-caryophyllene synthase 
 ghi-r.1   107918992   (+)-delta-cadinene synthase isozyme XC14 
 ghi-r.1   107919150   (+)-delta-cadinene synthase isozyme XC14 
 ghi-r.1   107920688   (+)-delta-cadinene synthase isozyme XC1 
 cit-r.1   127898646   (E)-beta-farnesene synthase-like 
 cit-r.1   127898638   (E)-beta-farnesene synthase-like 
 vvi-u.5   100261959   valencene synthase 
 vvi-u.5   100261963   valencene synthase-like 
 ppo-u.5   7457170   probable terpene synthase 6 
 mtr-u.5   120576876   probable terpene synthase 2 
 mtr-u.5   120577043   probable terpene synthase 2 
 mtr-u.5   120576871   probable terpene synthase 2 
 sly-u.5   TPS35   alpha-humulene_(-)-(E)-beta-caryophyllene synthase 
 sly-u.5   101257190   sesquiterpene synthase 15 
 nta-r.1   142175414   sesquiterpene synthase 12-like 
 nta-r.1   142175522   sesquiterpene synthase 12-like 
 osa-u.5   4344635   (E)-beta-caryophyllene synthase 
 zma-u.5   100281754   terpene synthase 7 
 zma-u.5   100273678   uncharacterized LOC100273678 
 zma-u.5   542156   uncharacterized LOC542156 
 tae-r.2   123134095   zingiberene synthase-like 
 tae-r.2   123169778   tau-cadinol synthase 
 tae-r.2   123191554   tau-cadinol synthase 
 sbi-r.1   110434906   beta-sesquiphellandrene synthase-like 
 sbi-r.1   8085003   beta-sesquiphellandrene synthase-like 
 bdi-r.1   100826509   (+)-germacrene D synthase-like 
 bdi-r.1   100827547   (+)-germacrene D synthase 
 bdi-r.1   100831867   (E)-beta-farnesene synthase 

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Top 50 coexpressed genes to AT3G29410 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G29410 (ath-u.5 coexpression data)

CoexMap"822602"


athAT3G29410 | Entrez gene ID : 822602      
Species ath bra ghi cit vvi ppo mtr sly nta osa zma tae sbi bdi sot bna cre hvu gma
Paralog 10 2 3 2 2 1 3 2 2 1 3 3 2 3 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016102 [list] [network] diterpenoid biosynthetic process  (46 genes)  IEA  
GO:0016114 [list] [network] terpenoid biosynthetic process  (109 genes)  IDA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0010333 [list] [network] terpene synthase activity  (18 genes)  IDA  
Protein NP_001325487.1 [sequence] [blastp]
NP_189587.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cyto_E.R. 4,  nucl 1,  vacu 1,  cysk 1,  golg 1,  nucl_plas 1  (predict for NP_001325487.1)
chlo 9,  mito 1,  E.R. 1  (predict for NP_189587.1)
Subcellular
localization
TargetP
scret 7,  other 5  (predict for NP_001325487.1)
chlo 5  (predict for NP_189587.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G29410
ath-r.7
for
AT3G29410
ath-m.9
for
AT3G29410
ath-e.2
for
AT3G29410
ath-m.4.bio
for
AT3G29410
ath-m.4.hor
for
AT3G29410
ath-m.4.lig
for
AT3G29410
ath-m.4.str
for
AT3G29410
ath-m.4.tis
for
AT3G29410
ath-u.5
for
AT1G33750
bra-r.6
for
103874257
bra-r.6
for
103874801
ghi-r.1
for
107918992
ghi-r.1
for
107919150
ghi-r.1
for
107920688
cit-r.1
for
127898646
cit-r.1
for
127898638
vvi-u.5
for
100261959
vvi-u.5
for
100261963
ppo-u.5
for
7457170
mtr-u.5
for
120576876
mtr-u.5
for
120577043
mtr-u.5
for
120576871
sly-u.5
for
TPS35
sly-u.5
for
101257190
nta-r.1
for
142175414
nta-r.1
for
142175522
osa-u.5
for
4344635
zma-u.5
for
100281754
zma-u.5
for
100273678
zma-u.5
for
542156
tae-r.2
for
123134095
tae-r.2
for
123169778
tae-r.2
for
123191554
sbi-r.1
for
110434906
sbi-r.1
for
8085003
bdi-r.1
for
100826509
bdi-r.1
for
100827547
bdi-r.1
for
100831867


Ortholog ID: 38
Species ath ath bra bra ghi ghi ghi cit cit ppo mtr mtr mtr sly sly sot nta nta nta osa zma zma tae hvu sbi
Symbol AT3G29410 AT1G33750 LOC103849591 LOC103849526 LOC107903499 LOC107903503 LOC107903500 LOC127898638 LOC102631432 LOC7454979 LOC120577043 LOC120580864 LOC11426332 TPS35 SSTLE1 LOC102592011 LOC142175522 LOC107793666 LOC107774988 LOC4332831 LOC103641099 LOC103641097 LOC123191554 LOC123439124 LOC8064774
Function* Terpenoid cyclases/Protein prenyltransferases superfamily protein Terpenoid cyclases/Protein prenyltransferases superfamily protein alpha-humulene/(-)-(E)-beta-caryophyllene synthase alpha-humulene/(-)-(E)-beta-caryophyllene synthase (+)-delta-cadinene synthase isozyme C2 (+)-delta-cadinene synthase isozyme XC1 (+)-delta-cadinene synthase isozyme XC14-like (E)-beta-farnesene synthase-like (-)-germacrene D synthase-like (-)-germacrene D synthase probable terpene synthase 2 probable terpene synthase 2 probable sesquiterpene synthase alpha-humulene_(-)-(E)-beta-caryophyllene synthase sesquiterpene synthase 1 vetispiradiene synthase 3-like sesquiterpene synthase 12-like vetispiradiene synthase 3 sesquiterpene synthase 9-like tau-cadinol synthase (S)-beta-macrocarpene synthase-like (S)-beta-macrocarpene synthase tau-cadinol synthase alpha-terpineol synthase, chloroplastic-like alpha-humulene synthase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 4
bra04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00909 Sesquiterpenoid and triterpenoid biosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00909 Sesquiterpenoid and triterpenoid biosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00909 Sesquiterpenoid and triterpenoid biosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00909 Sesquiterpenoid and triterpenoid biosynthesis 3
cit00940 Phenylpropanoid biosynthesis 2
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00909 Sesquiterpenoid and triterpenoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00909 Sesquiterpenoid and triterpenoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00909 Sesquiterpenoid and triterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00061 Fatty acid biosynthesis 2
sly01040 Biosynthesis of unsaturated fatty acids 2
sly01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 5
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822602 840266 103849591 103849526 107903499 107903503 107903500 127898638 102631432 7454979 120577043 120580864 11426332 101264676 543549 102592011 142175522 107793666 107774988 4332831 103641099 103641097 123191554 123439124 8064774
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