ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AGL79	AGAMOUS-like 79
ath-m.4.bio	AGL79	AGAMOUS-like 79
ath-m.4.hor	AGL79	AGAMOUS-like 79
ath-m.4.lig	AGL79	AGAMOUS-like 79
ath-m.4.str	AGL79	AGAMOUS-like 79
ath-m.4.tis	AGL79	AGAMOUS-like 79
bra-r.6	103837223	truncated transcription factor CAULIFLOWER A
bra-r.6	103875061	truncated transcription factor CAULIFLOWER A
bna-r.1	106352326	truncated transcription factor CAULIFLOWER A-like

Annotation

functional annotation

KEGG

GO BP

GO:0010223 [list] [network] secondary shoot formation	(25 genes)	IMP
GO:0010311 [list] [network] lateral root formation	(61 genes)	IMP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem	(186 genes)	IMP
GO:0010629 [list] [network] negative regulation of gene expression	(323 genes)	IMP
GO:0048366 [list] [network] leaf development	(371 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus	(10367 genes)	IDA ISM
GO:0005737 [list] [network] cytoplasm	(14000 genes)	IDA

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(1620 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_189645.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for NP_189645.2)

Subcellular
localization
TargetP

mito 7, other 5

(predict for NP_189645.2)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AGL79	ath-m.4.bio for AGL79	ath-m.4.hor for AGL79	ath-m.4.lig for AGL79	ath-m.4.str for AGL79	ath-m.4.tis for AGL79	bra-r.6 for 103837223	bra-r.6 for 103875061	bna-r.1 for 106352326