ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT3G44850	Protein kinase superfamily protein
ath-r.7	AT3G44850	Protein kinase superfamily protein
ath-m.9	AT3G44850	Protein kinase superfamily protein
ath-e.2	AT3G44850	Protein kinase superfamily protein
ath-m.4.bio	AT3G44850	Protein kinase superfamily protein
ath-m.4.hor	AT3G44850	Protein kinase superfamily protein
ath-m.4.lig	AT3G44850	Protein kinase superfamily protein
ath-m.4.str	AT3G44850	Protein kinase superfamily protein
ath-m.4.tis	AT3G44850	Protein kinase superfamily protein
ath-u.5	SRPK4	ser/arg-rich protein kinase 4
ath-u.5	AT5G22840	Protein kinase superfamily protein
gma-u.5	100810777	serine/threonine-protein kinase SRPK
gma-u.5	100809984	SRSF protein kinase 3
gma-u.5	100803070	serine/threonine-protein kinase spk-1
vvi-u.5	100254468	uncharacterized LOC100254468
vvi-u.5	100260164	uncharacterized LOC100260164
ppo-u.5	7474920	uncharacterized LOC7474920
ppo-u.5	18100088	uncharacterized LOC18100088
ppo-u.5	18098008	uncharacterized LOC18098008
mtr-u.5	25492350	SRSF protein kinase 2
mtr-u.5	25487481	SRSF protein kinase 3
mtr-u.5	11434131	SRSF protein kinase 1
sly-u.5	101245552	uncharacterized LOC101245552
sly-u.5	101267678	uncharacterized LOC101267678
sly-u.5	101253143	uncharacterized LOC101253143
osa-u.5	4334107	uncharacterized LOC4334107
zma-u.5	100381954	putative protein kinase superfamily protein
zma-u.5	100285074	uncharacterized LOC100285074

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009506 [list] [network] plasmodesma	(874 genes)	HDA
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

Protein

NP_190071.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 3, pero 1, cysk_nucl 1, nucl_plas 1

(predict for NP_190071.1)

Subcellular
localization
TargetP

other 9

(predict for NP_190071.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G44850	ath-r.7 for AT3G44850	ath-m.9 for AT3G44850	ath-e.2 for AT3G44850	ath-m.4.bio for AT3G44850	ath-m.4.hor for AT3G44850	ath-m.4.lig for AT3G44850	ath-m.4.str for AT3G44850	ath-m.4.tis for AT3G44850	ath-u.5 for SRPK4	ath-u.5 for AT5G22840	gma-u.5 for 100810777	gma-u.5 for 100809984	gma-u.5 for 100803070	vvi-u.5 for 100254468	vvi-u.5 for 100260164	ppo-u.5 for 7474920	ppo-u.5 for 18100088	ppo-u.5 for 18098008	mtr-u.5 for 25492350	mtr-u.5 for 25487481	mtr-u.5 for 11434131	sly-u.5 for 101245552	sly-u.5 for 101267678	sly-u.5 for 101253143	osa-u.5 for 4334107	zma-u.5 for 100381954	zma-u.5 for 100285074

Ortholog

Ortholog ID: 2732

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

Protein kinase superfamily protein

serine/threonine-protein kinase SRPK

SRSF protein kinase 2

SRSF protein kinase 1-like

SRSF protein kinase 1

SRSF protein kinase 2

SRSF protein kinase 3

uncharacterized LOC102630970

uncharacterized LOC102631272

SRSF protein kinase 3

SRSF protein kinase 2

uncharacterized LOC100254468

uncharacterized LOC100260164

uncharacterized LOC18098008

uncharacterized LOC18100088

SRSF protein kinase 3

SRSF protein kinase 2

uncharacterized LOC101253143

uncharacterized LOC101245552

SRSF protein kinase 1-like

serine/threonine-protein kinase SRPK-like

uncharacterized LOC107784466

uncharacterized LOC107832169

uncharacterized LOC4334107

putative protein kinase superfamily protein

uncharacterized LOC100285074

SRSF protein kinase 1

SRSF protein kinase 1-like

SRSF protein kinase 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	6
gma03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo03013	Nucleocytoplasmic transport	2
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2
ppo04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00640	Propanoate metabolism	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2
nta00480	Glutathione metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2
nta00480	Glutathione metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	9
zma03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	6
tae03015	mRNA surveillance pathway	3
tae04136	Autophagy - other	3
tae04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01232	Nucleotide metabolism	3
cre00240	Pyrimidine metabolism	3
cre01240	Biosynthesis of cofactors	3
cre00230	Purine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

823619

832347

103845517

103851466

106371635

106384512

107957520

107905342

102630970

102631272

100809984

100791829

100254468

100260164

18098008

18100088

25487481

25492350

101253143

101245552

102588730

102601887

107784466

107832169

4334107

100381954

100285074

123113310

123122823

123452225

8086251

100845239

5723609

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT3G44850 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G44850 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	11	3	2	3	3	3	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G44850 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G44850 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**