ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-m.9	SYP72	syntaxin of plants 72
ath-m.4.bio	SYP72	syntaxin of plants 72
ath-m.4.hor	SYP72	syntaxin of plants 72
ath-m.4.lig	SYP72	syntaxin of plants 72
ath-m.4.str	SYP72	syntaxin of plants 72
ath-m.4.tis	SYP72	syntaxin of plants 72
ath-u.5	SYP71	syntaxin of plants 71
gma-u.5	100780958	syntaxin-71-like
gma-u.5	100786529	syntaxin-71
vvi-u.5	100258712	syntaxin-71
vvi-u.5	100853404	syntaxin-71
vvi-u.5	100258582	syntaxin-71
ppo-u.5	7467617	syntaxin-71
ppo-u.5	18100210	syntaxin-71
mtr-u.5	11423274	syntaxin-71
mtr-u.5	11429735	syntaxin-71
sly-u.5	101249033	syntaxin-71
sly-u.5	101253454	syntaxin-71-like
osa-u.5	4339549	syntaxin-71
osa-u.5	4324146	probable histone chaperone ASF1A
zma-u.5	100283631	uncharacterized LOC100283631

Annotation

functional annotation

KEGG

ath04130 [list] [network] SNARE interactions in vesicular transport (55 genes)

GO BP

GO:0006886 [list] [network] intracellular protein transport

(149 genes)

TAS

GO CC

GO:0005768 [list] [network] endosome	(359 genes)	IDA
GO:0005794 [list] [network] Golgi apparatus	(1198 genes)	ISM
GO:0005886 [list] [network] plasma membrane	(2598 genes)	IDA

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_001319688.1 [sequence] [blastp]
NP_001326893.1 [sequence] [blastp]
NP_566878.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, mito 1, extr 1, pero 1, golg 1, chlo_mito 1, cyto_mito 1, mito_plas 1	(predict for NP_001319688.1)
cyto 5, chlo 3, nucl 1, chlo_mito 1	(predict for NP_001326893.1)
nucl 6, mito 1, extr 1, pero 1, golg 1, chlo_mito 1, cyto_mito 1, mito_plas 1	(predict for NP_566878.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001319688.1)
other 9	(predict for NP_001326893.1)
other 9	(predict for NP_566878.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for SYP72	ath-m.4.bio for SYP72	ath-m.4.hor for SYP72	ath-m.4.lig for SYP72	ath-m.4.str for SYP72	ath-m.4.tis for SYP72	ath-u.5 for SYP71	gma-u.5 for 100780958	gma-u.5 for 100786529	vvi-u.5 for 100258712	vvi-u.5 for 100853404	vvi-u.5 for 100258582	ppo-u.5 for 7467617	ppo-u.5 for 18100210	mtr-u.5 for 11423274	mtr-u.5 for 11429735	sly-u.5 for 101249033	sly-u.5 for 101253454	osa-u.5 for 4339549	osa-u.5 for 4324146	zma-u.5 for 100283631

Ortholog

Ortholog ID: 1921

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SYP71

Function^*

syntaxin of plants 71

syntaxin-71

syntaxin-71-like

syntaxin-71

syntaxin-71-like

syntaxin-71

syntaxin-71-like

syntaxin-71

probable histone chaperone ASF1A

syntaxin-71

uncharacterized LOC100283631

syntaxin-71

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	3
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi04130	SNARE interactions in vesicular transport	4
ghi03250	Viral life cycle - HIV-1	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	7
ghi04130	SNARE interactions in vesicular transport	4
ghi00230	Purine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2
cit04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2
cit04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2
gma04145	Phagosome	2
gma04130	SNARE interactions in vesicular transport	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	9
vvi00190	Oxidative phosphorylation	4
vvi00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	7
ppo03050	Proteasome	2
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00541	Biosynthesis of various nucleotide sugars	2
sly01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2
sot00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2
sot04142	Lysosome	2
sot04145	Phagosome	2
sot03050	Proteasome	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	4
nta03018	RNA degradation	2
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	6
nta03018	RNA degradation	2
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	9
osa04145	Phagosome	7
osa04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	5
zma03050	Proteasome	2
zma03013	Nucleocytoplasmic transport	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	6
tae03013	Nucleocytoplasmic transport	2
tae03015	mRNA surveillance pathway	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04130	SNARE interactions in vesicular transport	2
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	6
cre04130	SNARE interactions in vesicular transport	2
cre03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04130	SNARE interactions in vesicular transport	6
cre04144	Endocytosis	4
cre03250	Viral life cycle - HIV-1	2
cre03272	Virion - Hepatitis viruses	2

Expression

Expression pattern

Entrez Gene ID^*

820132

103847949

103870522

106452763

106427952

107899658

107905292

127901480

102613617

100804155

100258582

100258712

7467617

11423274

101249033

101253454

102603109

102580450

107808330

107786060

4324146

4339549

100283631

123144463

123449514

8063555

100822792

5725580

5725581

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to SYP72 (ath-m.9 coexpression data)

Top 50 enrichment test to SYP72 (ath-m.9 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	7	2	3	2	2	2	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to SYP72 (ath-m.9 coexpression data)

Top 50 enrichment test to SYP72 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**