ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	CEP3	Cysteine proteinases superfamily protein
ath-r.7	CEP3	Cysteine proteinases superfamily protein
ath-m.9	CEP3	Cysteine proteinases superfamily protein
ath-e.2	CEP3	Cysteine proteinases superfamily protein
ath-m.4.bio	CEP3	Cysteine proteinases superfamily protein
ath-m.4.hor	CEP3	Cysteine proteinases superfamily protein
ath-m.4.lig	CEP3	Cysteine proteinases superfamily protein
ath-m.4.str	CEP3	Cysteine proteinases superfamily protein
ath-m.4.tis	CEP3	Cysteine proteinases superfamily protein
ath-u.5	CEP2	Cysteine proteinases superfamily protein
ath-u.5	CEP1	Cysteine proteinases superfamily protein
bra-r.6	103858440	KDEL-tailed cysteine endopeptidase CEP1
bra-r.6	103873154	KDEL-tailed cysteine endopeptidase CEP3
bra-r.6	103873155	KDEL-tailed cysteine endopeptidase CEP2
bna-r.1	125610298	KDEL-tailed cysteine endopeptidase CEP3
bna-r.1	106388417	KDEL-tailed cysteine endopeptidase CEP1-like
bna-r.1	106444219	KDEL-tailed cysteine endopeptidase CEP2
ghi-r.1	107949718	vignain
ghi-r.1	107946250	vignain
ghi-r.1	121211053	vignain
cit-r.1	102611288	vignain
gma-u.5	CYSP2	cysteine proteinase
gma-u.5	CYSP1	cysteine proteinase
gma-u.5	100806581	vignain
vvi-u.5	100250141	vignain
vvi-u.5	100264473	vignain
ppo-u.5	7463076	vignain
ppo-u.5	7463075	vignain
mtr-u.5	25489522	vignain
sly-u.5	101250302	vignain-like
sly-u.5	CysEP	KDEL-tailed cysteine endopeptidase CysEP
nta-r.1	107771814	vignain-like
nta-r.1	107771939	vignain-like
nta-r.1	107774954	vignain-like
osa-u.5	4350216	cysteine endopeptidase RepA-like
osa-u.5	4346292	KDEL-tailed cysteine endopeptidase CEP1
zma-u.5	100284911	uncharacterized LOC100284911
zma-u.5	103636041	uncharacterized LOC103636041
tae-r.2	123071248	thiol protease SEN102
tae-r.2	123062474	thiol protease SEN102
tae-r.2	123079604	thiol protease SEN102
hvu-r.1	123440579	KDEL-tailed cysteine endopeptidase CEP1-like
hvu-r.1	123445005	thiol protease SEN102-like
sbi-r.1	8058001	thiol protease SEN102
bdi-r.1	100830153	vignain
bdi-r.1	100827974	thiol protease SEN102

Top 50 coexpressed genes to CEP3 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CEP3 (ath-u.5 coexpression data)

CoexMap"823993"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0031667 [list] [network] response to nutrient levels

(296 genes)

IMP

GO CC

GO:0005576 [list] [network] extracellular region

(3158 genes)

ISM

GO MF

Protein

NP_001327487.1 [sequence] [blastp]
NP_566901.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, vacu 4, cyto 1, E.R. 1, cyto_E.R. 1	(predict for NP_001327487.1)
extr 4, chlo 1, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1	(predict for NP_566901.1)

Subcellular
localization
TargetP

scret 7	(predict for NP_001327487.1)
scret 7	(predict for NP_566901.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for CEP3	ath-r.7 for CEP3	ath-m.9 for CEP3	ath-e.2 for CEP3	ath-m.4.bio for CEP3	ath-m.4.hor for CEP3	ath-m.4.lig for CEP3	ath-m.4.str for CEP3	ath-m.4.tis for CEP3	ath-u.5 for CEP2	ath-u.5 for CEP1	bra-r.6 for 103858440	bra-r.6 for 103873154	bra-r.6 for 103873155	bna-r.1 for 125610298	bna-r.1 for 106388417	bna-r.1 for 106444219	ghi-r.1 for 107949718	ghi-r.1 for 107946250	ghi-r.1 for 121211053	cit-r.1 for 102611288	gma-u.5 for CYSP2	gma-u.5 for CYSP1	gma-u.5 for 100806581	vvi-u.5 for 100250141	vvi-u.5 for 100264473	ppo-u.5 for 7463076	ppo-u.5 for 7463075	mtr-u.5 for 25489522	sly-u.5 for 101250302	sly-u.5 for CysEP	nta-r.1 for 107771814	nta-r.1 for 107771939	nta-r.1 for 107774954	osa-u.5 for 4350216	osa-u.5 for 4346292	zma-u.5 for 100284911	zma-u.5 for 103636041	tae-r.2 for 123071248	tae-r.2 for 123062474	tae-r.2 for 123079604	hvu-r.1 for 123440579	hvu-r.1 for 123445005	sbi-r.1 for 8058001	bdi-r.1 for 100830153	bdi-r.1 for 100827974

Ortholog

Ortholog ID: 2225

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

CEP3

CEP2

CEP1

CYSP2

CYSP1

CysEP

Function^*

Cysteine proteinases superfamily protein

KDEL-tailed cysteine endopeptidase CEP1

KDEL-tailed cysteine endopeptidase CEP3

KDEL-tailed cysteine endopeptidase CEP2

KDEL-tailed cysteine endopeptidase CEP1

KDEL-tailed cysteine endopeptidase CEP2

KDEL-tailed cysteine endopeptidase CEP3

vignain

cysteine proteinase

vignain

vignain-like

KDEL-tailed cysteine endopeptidase CysEP

vignain-like

cysteine endopeptidase RepA-like

KDEL-tailed cysteine endopeptidase CEP1

uncharacterized LOC103636041

KDEL-tailed cysteine endopeptidase CEP1

thiol protease SEN102

vignain

thiol protease SEN102

KDEL-tailed cysteine endopeptidase CEP1-like

thiol protease SEN102-like

thiol protease SEN102

vignain

thiol protease SEN102

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00062	Fatty acid elongation	2
ath01212	Fatty acid metabolism	2
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	4
bna04075	Plant hormone signal transduction	3
bna04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00020	Citrate cycle (TCA cycle)	5
bna04016	MAPK signaling pathway - plant	4
bna04070	Phosphatidylinositol signaling system	4
bna04075	Plant hormone signal transduction	4
bna04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	2
ghi00561	Glycerolipid metabolism	2
ghi00600	Sphingolipid metabolism	2
ghi00603	Glycosphingolipid biosynthesis - globo and isoglobo series	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	2
ghi00561	Glycerolipid metabolism	2
ghi00600	Sphingolipid metabolism	2
ghi00603	Glycosphingolipid biosynthesis - globo and isoglobo series	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00460	Cyanoamino acid metabolism	2
cit00500	Starch and sucrose metabolism	2
cit00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00562	Inositol phosphate metabolism	2
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00460	Cyanoamino acid metabolism	2
tae00500	Starch and sucrose metabolism	2
tae00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00561	Glycerolipid metabolism	2
hvu00010	Glycolysis / Gluconeogenesis	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	2
sbi00500	Starch and sucrose metabolism	2
sbi00999	Biosynthesis of various plant secondary metabolites	2

Expression

Expression pattern

Entrez Gene ID^*

823993

823992

835091

103858440

103873154

103873155

106388481

106428928

106428938

107946250

107946590

107886152

102611288

547487

548011

100806581

100250141

100264473

7463076

7463075

25489522

101250302

101252974

107771939

107815477

4350216

4346292

103636041

107546781

123071248

123082269

123071261

123440579

123445005

8058001

100830153

100827974

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	nta	osa	zma	tae	hvu	sbi	bdi	sot	cre
Paralog	11	3	3	3	1	3	2	2	1	2	3	2	2	3	2	1	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CEP3 (ath-u.5 coexpression data)

Top 50 enrichment test to CEP3 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**