Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G48480   Cysteine proteinases superfamily protein 
 ath-r.7   AT3G48480   Cysteine proteinases superfamily protein 
 ath-m.9   AT3G48480   Cysteine proteinases superfamily protein 
 ath-e.2   AT3G48480   Cysteine proteinases superfamily protein 
 ath-m.4.bio   AT3G48480   Cysteine proteinases superfamily protein 
 ath-m.4.hor   AT3G48480   Cysteine proteinases superfamily protein 
 ath-m.4.lig   AT3G48480   Cysteine proteinases superfamily protein 
 ath-m.4.str   AT3G48480   Cysteine proteinases superfamily protein 
 ath-m.4.tis   AT3G48480   Cysteine proteinases superfamily protein 
 gma-u.5   100780621   probable ubiquitin-like-specific protease 2A 
 vvi-u.5   100251251   probable ubiquitin-like-specific protease 2A 
 ppo-u.5   7463098   probable ubiquitin-like-specific protease 2A 
 ppo-u.5   7474397   probable ubiquitin-like-specific protease 2A 
 mtr-u.5   25489499   ubiquitin-like-specific protease 1C 
 sly-u.5   101254774   ubiquitin-like-specific protease 1D 
 sly-u.5   101243669   ubiquitin-like-specific protease 1D 
 osa-u.5   9272014   probable ubiquitin-like-specific protease 2B 
 zma-u.5   100194202   Cysteine proteinases superfamily protein 

close


Top 50 coexpressed genes to AT3G48480 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G48480 (ath-u.5 coexpression data)

CoexMap"824007"


athAT3G48480 | Entrez gene ID : 824007      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 1 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0040029 [list] [network] epigenetic regulation of gene expression  (174 genes)  IGI  
GO:0006508 [list] [network] proteolysis  (361 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0016929 [list] [network] deSUMOylase activity  (1 genes)  IDA  
GO:0008234 [list] [network] cysteine-type peptidase activity  (75 genes)  IEA  
Protein NP_190417.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  chlo_mito 4  (predict for NP_190417.4)
Subcellular
localization
TargetP
mito 6  (predict for NP_190417.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G48480

.
ath-r.7
for
AT3G48480

.
ath-m.9
for
AT3G48480

.
ath-e.2
for
AT3G48480

.
ath-m.4.bio
for
AT3G48480

.
ath-m.4.hor
for
AT3G48480

.
ath-m.4.lig
for
AT3G48480

.
ath-m.4.str
for
AT3G48480

.
ath-m.4.tis
for
AT3G48480

.
gma-u.5
for
100780621

.
vvi-u.5
for
100251251

.
ppo-u.5
for
7463098

.
ppo-u.5
for
7474397

.
mtr-u.5
for
25489499

.
sly-u.5
for
101254774

.
sly-u.5
for
101243669

.
osa-u.5
for
9272014

.
zma-u.5
for
100194202

.


Ortholog ID: 5323
Species ath gma sly sly osa zma bra vvi ppo ppo mtr tae hvu ghi ghi bna bna sbi sot sot cit nta nta
Symbol AT3G48480 LOC100780621 LOC101243669 LOC101254774 LOC9272014 LOC100194202 LOC103873532 LOC100251251 LOC7463098 LOC7474397 LOC25489499 LOC123096355 LOC123447881 LOC107943741 LOC107941964 LOC111211108 LOC106347621 LOC8064370 LOC102593729 LOC102585589 LOC102621283 LOC107790110 LOC107832363
Function* Cysteine proteinases superfamily protein probable ubiquitin-like-specific protease 2A ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D probable ubiquitin-like-specific protease 2B Cysteine proteinases superfamily protein probable ubiquitin-like-specific protease 2B probable ubiquitin-like-specific protease 2A probable ubiquitin-like-specific protease 2A probable ubiquitin-like-specific protease 2A ubiquitin-like-specific protease 1C probable ubiquitin-like-specific protease 2B probable ubiquitin-like-specific protease 2A probable ubiquitin-like-specific protease 2A probable ubiquitin-like-specific protease 2B probable ubiquitin-like-specific protease 2B probable ubiquitin-like-specific protease 2B probable ubiquitin-like-specific protease 2B ubiquitin-like-specific protease 1D probable ubiquitin-like-specific protease 2B probable ubiquitin-like-specific protease 2B uncharacterized LOC107790110 putative ubiquitin-like-specific protease 2B
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824007 100780621 101243669 101254774 9272014 100194202 103873532 100251251 7463098 7474397 25489499 123096355 123447881 107943741 107941964 111211108 106347621 8064370 102593729 102585589 102621283 107790110 107832363
The preparation time of this page was 0.4 [sec].