ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT3G51660	Tautomerase/MIF superfamily protein
ath-r.7	AT3G51660	Tautomerase/MIF superfamily protein
ath-m.9	AT3G51660	Tautomerase/MIF superfamily protein
ath-e.2	AT3G51660	Tautomerase/MIF superfamily protein
ath-m.4.bio	AT3G51660	Tautomerase/MIF superfamily protein
ath-m.4.hor	AT3G51660	Tautomerase/MIF superfamily protein
ath-m.4.lig	AT3G51660	Tautomerase/MIF superfamily protein
ath-m.4.str	AT3G51660	Tautomerase/MIF superfamily protein
ath-m.4.tis	AT3G51660	Tautomerase/MIF superfamily protein
ath-u.5	AT5G01650	Tautomerase/MIF superfamily protein
ath-u.5	AT5G57170	Tautomerase/MIF superfamily protein
gma-u.5	100796369	macrophage migration inhibitory factor homolog
gma-u.5	100790725	macrophage migration inhibitory factor homolog
gma-u.5	100789311	macrophage migration inhibitory factor homolog
vvi-u.5	100251764	uncharacterized LOC100251764
vvi-u.5	100266836	uncharacterized LOC100266836
ppo-u.5	7487343	uncharacterized LOC7487343
ppo-u.5	7460405	uncharacterized LOC7460405
mtr-u.5	11415714	macrophage migration inhibitory factor homolog
mtr-u.5	11420390	macrophage migration inhibitory factor homolog
mtr-u.5	112421046	macrophage migration inhibitory factor homolog
sly-u.5	101244628	uncharacterized LOC101244628
sly-u.5	101253800	uncharacterized LOC101253800
sly-u.5	101255350	uncharacterized LOC101255350
osa-u.5	4351273	uncharacterized LOC4351273
osa-u.5	4341957	macrophage migration inhibitory factor homolog
osa-u.5	4349563	uncharacterized LOC4349563
zma-u.5	100284546	macrophage migration inhibitory factor
zma-u.5	100284350	uncharacterized LOC100284350

Top 50 coexpressed genes to AT3G51660 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT3G51660 (ath-u.5 coexpression data)

CoexMap"824329"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005777 [list] [network] peroxisome	(313 genes)	HDA IDA
GO:0005634 [list] [network] nucleus	(10367 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14000 genes)	IDA ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_566955.1 [sequence] [blastp]

Subcellular
localization
wolf

cysk 5, cyto 2, extr 1, chlo 1, golg 1

(predict for NP_566955.1)

Subcellular
localization
TargetP

other 8

(predict for NP_566955.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G51660	ath-r.7 for AT3G51660	ath-m.9 for AT3G51660	ath-e.2 for AT3G51660	ath-m.4.bio for AT3G51660	ath-m.4.hor for AT3G51660	ath-m.4.lig for AT3G51660	ath-m.4.str for AT3G51660	ath-m.4.tis for AT3G51660	ath-u.5 for AT5G01650	ath-u.5 for AT5G57170	gma-u.5 for 100796369	gma-u.5 for 100790725	gma-u.5 for 100789311	vvi-u.5 for 100251764	vvi-u.5 for 100266836	ppo-u.5 for 7487343	ppo-u.5 for 7460405	mtr-u.5 for 11415714	mtr-u.5 for 11420390	mtr-u.5 for 112421046	sly-u.5 for 101244628	sly-u.5 for 101253800	sly-u.5 for 101255350	osa-u.5 for 4351273	osa-u.5 for 4341957	osa-u.5 for 4349563	zma-u.5 for 100284546	zma-u.5 for 100284350

Ortholog

Ortholog ID: 1277

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

Tautomerase/MIF superfamily protein

macrophage migration inhibitory factor homolog

uncharacterized LOC102631169

uncharacterized LOC102630667

macrophage migration inhibitory factor homolog

uncharacterized LOC100305503

uncharacterized LOC100266836

uncharacterized LOC100251764

uncharacterized LOC7474727

uncharacterized LOC7460405

macrophage migration inhibitory factor homolog

uncharacterized LOC101253800

uncharacterized LOC101255350

macrophage migration inhibitory factor homolog

uncharacterized LOC107775000

uncharacterized LOC107787063

uncharacterized LOC4351273

uncharacterized LOC4349563

macrophage migration inhibitory factor

uncharacterized LOC100284350

macrophage migration inhibitory factor homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00561	Glycerolipid metabolism	3
ath00564	Glycerophospholipid metabolism	2
ath01240	Biosynthesis of cofactors	2
ath00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	3
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2
bra01240	Biosynthesis of cofactors	2
bra00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	3
bra00480	Glutathione metabolism	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00350	Tyrosine metabolism	2
bna00360	Phenylalanine metabolism	2
bna00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi00360	Phenylalanine metabolism	2
ghi00260	Glycine, serine and threonine metabolism	2
ghi00630	Glyoxylate and dicarboxylate metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3
gma00220	Arginine biosynthesis	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	3
ppo04626	Plant-pathogen interaction	2
ppo00630	Glyoxylate and dicarboxylate metabolism	2
ppo00710	Carbon fixation by Calvin cycle	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2
ppo00230	Purine metabolism	2
ppo00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00350	Tyrosine metabolism	2
mtr00360	Phenylalanine metabolism	2
mtr00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	8
sot04145	Phagosome	7
sot04142	Lysosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00350	Tyrosine metabolism	2
nta00360	Phenylalanine metabolism	2
nta00480	Glutathione metabolism	2
nta03010	Ribosome	2
nta00061	Fatty acid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	4
osa00010	Glycolysis / Gluconeogenesis	3
osa00051	Fructose and mannose metabolism	2
osa00350	Tyrosine metabolism	2
osa00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	5
osa00010	Glycolysis / Gluconeogenesis	5
osa01200	Carbon metabolism	4
osa00030	Pentose phosphate pathway	3
osa00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00710	Carbon fixation by Calvin cycle	3
zma01200	Carbon metabolism	3
zma00240	Pyrimidine metabolism	2
zma01232	Nucleotide metabolism	2
zma00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	6
zma00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	3
tae00350	Tyrosine metabolism	2
tae00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	8
tae00350	Tyrosine metabolism	3
tae00360	Phenylalanine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00350	Tyrosine metabolism	2
sbi00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3
bdi00350	Tyrosine metabolism	3
bdi00360	Phenylalanine metabolism	3
bdi03083	Polycomb repressive complex	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3
bdi00350	Tyrosine metabolism	3
bdi00360	Phenylalanine metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

824329

831707

103845155

103855407

106370341

106427174

107937047

107924291

102631169

102630667

100789311

100305503

100266836

100251764

7474727

7460405

11446016

101253800

101255350

102602878

102590623

107775000

107787063

4351273

4349563

100284546

100284350

123164674

123120489

123408541

123395265

8063823

8079974

100834365

100846149

5717316

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Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	11	3	2	2	3	3	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G51660 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G51660 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**