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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   INO80   DNA helicase INO80-like protein 
 ath-r.7   INO80   DNA helicase INO80-like protein 
 ath-m.9   INO80   DNA helicase INO80-like protein 
 ath-e.2   INO80   DNA helicase INO80-like protein 
 ath-m.4.bio   INO80   DNA helicase INO80-like protein 
 ath-m.4.hor   INO80   DNA helicase INO80-like protein 
 ath-m.4.lig   INO80   DNA helicase INO80-like protein 
 ath-m.4.str   INO80   DNA helicase INO80-like protein 
 ath-m.4.tis   INO80   DNA helicase INO80-like protein 
 gma-u.5   100810344   chromatin-remodeling ATPase INO80 
 gma-u.5   100796167   chromatin-remodeling ATPase INO80 
 gma-u.5   100780615   chromatin-remodeling ATPase INO80 
 vvi-u.5   100250397   chromatin-remodeling ATPase INO80 
 ppo-u.5   7496118   chromatin-remodeling ATPase INO80 
 ppo-u.5   7483966   chromatin-remodeling ATPase INO80 
 mtr-u.5   11422720   chromatin-remodeling ATPase INO80 
 sly-u.5   101260036   chromatin-remodeling ATPase INO80 
 osa-u.5   4332853   chromatin-remodeling ATPase INO80 
 zma-u.5   103640309   chromatin-remodeling ATPase INO80 
 zma-u.5   103634945   chromatin-remodeling ATPase INO80 

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Top 50 coexpressed genes to INO80 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to INO80 (ath-u.5 coexpression data)

CoexMap"824897"


athINO80 | Entrez gene ID : 824897      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 3 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03082 [list] [network] ATP-dependent chromatin remodeling (64 genes)
GO BP
GO:1905168 [list] [network] positive regulation of double-strand break repair via homologous recombination  (1 genes)  IGI  
GO:0045739 [list] [network] positive regulation of DNA repair  (4 genes)  IMP  
GO:0016444 [list] [network] somatic cell DNA recombination  (10 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0042393 [list] [network] histone binding  (50 genes)  IDA  
Protein NP_001190117.1 [sequence] [blastp]
NP_001319776.1 [sequence] [blastp]
NP_001327678.1 [sequence] [blastp]
NP_191289.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  pero 1,  cysk 1  (predict for NP_001190117.1)
nucl 4,  cyto 4,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_001319776.1)
cyto 6,  nucl 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001327678.1)
nucl 4,  cyto 4,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_191289.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001190117.1)
other 7  (predict for NP_001319776.1)
other 7  (predict for NP_001327678.1)
other 7  (predict for NP_191289.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
INO80

.
ath-r.7
for
INO80

.
ath-m.9
for
INO80

.
ath-e.2
for
INO80

.
ath-m.4.bio
for
INO80

.
ath-m.4.hor
for
INO80

.
ath-m.4.lig
for
INO80

.
ath-m.4.str
for
INO80

.
ath-m.4.tis
for
INO80

.
gma-u.5
for
100810344

.
gma-u.5
for
100796167

.
gma-u.5
for
100780615

.
vvi-u.5
for
100250397

.
ppo-u.5
for
7496118

.
ppo-u.5
for
7483966

.
mtr-u.5
for
11422720

.
sly-u.5
for
101260036

.
osa-u.5
for
4332853

.
zma-u.5
for
103640309

.
zma-u.5
for
103634945

.


Ortholog ID: 8059
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol INO80 LOC100796167 LOC100780615 LOC101260036 LOC4332853 LOC103634945 LOC103640309 LOC103863052 LOC103841637 LOC100250397 LOC7483966 LOC7496118 LOC11422720 LOC123097367 LOC123092095 LOC123448614 LOC107889418 LOC107891326 LOC106414886 LOC106451580 LOC8082649 LOC102593931 LOC102628786 LOC100834833 LOC107814951 LOC107814884
Function* DNA helicase INO80-like protein chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80 DNA helicase INO80 DNA helicase INO80 chromatin-remodeling ATPase INO80 DNA helicase INO80 chromatin-remodeling ATPase INO80 chromatin-remodeling ATPase INO80
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03022 Basal transcription factors 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta04712 Circadian rhythm - plant 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03022 Basal transcription factors 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta04712 Circadian rhythm - plant 2
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824897 100796167 100780615 101260036 4332853 103634945 103640309 103863052 103841637 100250397 7483966 7496118 11422720 123097367 123092095 123448614 107889418 107891326 106414886 106451580 8082649 102593931 102628786 100834833 107814951 107814884
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