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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   LBD29   lateral organ boundaries-domain 29 
 ath-m.4.bio   LBD29   lateral organ boundaries-domain 29 
 ath-m.4.hor   LBD29   lateral organ boundaries-domain 29 
 ath-m.4.lig   LBD29   lateral organ boundaries-domain 29 
 ath-m.4.str   LBD29   lateral organ boundaries-domain 29 
 ath-m.4.tis   LBD29   lateral organ boundaries-domain 29 
 mtr-u.5   25484301   LOB domain-containing protein 29 
 mtr-u.5   25499235   LOB domain-containing protein 29 
 osa-u.5   9271993   LOB domain-containing protein CRL1-like 

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Top 50 coexpressed genes to LBD29 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LBD29 (ath-m.9 coexpression data)

CoexMap"824988"


athLBD29 | Entrez gene ID : 824988      
Species ath mtr osa tae zma bdi vvi sbi ppo bna sly nta cre sot hvu ghi gma cit bra
Paralog 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990110 [list] [network] callus formation  (29 genes)  IMP  
GO:0010311 [list] [network] lateral root formation  (61 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0001216 [list] [network] DNA-binding transcription activator activity  (45 genes)  IDA  
Protein NP_191378.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  chlo 3  (predict for NP_191378.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_191378.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
LBD29

.
ath-m.4.bio
for
LBD29

.
ath-m.4.hor
for
LBD29

.
ath-m.4.lig
for
LBD29

.
ath-m.4.str
for
LBD29

.
ath-m.4.tis
for
LBD29

.
mtr-u.5
for
25484301

.
mtr-u.5
for
25499235

.
osa-u.5
for
9271993

.


Ortholog ID: 2889
Species osa mtr mtr nta nta
Symbol LOC9271993 LOC25484301 LOC25499235 LOC107824204 LOC107769169
Function* LOB domain-containing protein CRL1-like LOB domain-containing protein 29 LOB domain-containing protein 29 LOB domain-containing protein 14-like LOB domain-containing protein 14
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 9271993 25484301 25499235 107824204 107769169
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