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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G58830   haloacid dehalogenase (HAD) superfamily protein 
 ath-r.7   AT3G58830   haloacid dehalogenase (HAD) superfamily protein 
 ath-m.9   AT3G58830   haloacid dehalogenase (HAD) superfamily protein 
 ath-e.2   AT3G58830   haloacid dehalogenase (HAD) superfamily protein 
 ath-m.4.bio   AT3G58830   haloacid dehalogenase (HAD) superfamily protein 
 ath-m.4.hor   AT3G58830   haloacid dehalogenase (HAD) superfamily protein 
 ath-m.4.lig   AT3G58830   haloacid dehalogenase (HAD) superfamily protein 
 ath-m.4.str   AT3G58830   haloacid dehalogenase (HAD) superfamily protein 
 ath-m.4.tis   AT3G58830   haloacid dehalogenase (HAD) superfamily protein 
 bra-r.6   103830186   uncharacterized LOC103830186 
 bna-r.1   106353171   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 bna-r.1   106428252   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial-like 
 ghi-r.1   107959668   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 ghi-r.1   107959716   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 cit-r.1   102624238   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 gma-u.5   100820364   uncharacterized LOC100820364 
 vvi-u.5   100252338   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 ppo-u.5   7464795   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 ppo-u.5   7480730   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 mtr-u.5   25483052   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 mtr-u.5   11435953   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 sly-u.5   101261489   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial-like 
 sly-u.5   101255115   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 sot-r.1   102595000   uncharacterized LOC102595000 
 sot-r.1   102598279   uncharacterized LOC102598279 
 nta-r.1   107795273   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 nta-r.1   107790298   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 nta-r.1   107786118   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 osa-u.5   4325633   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 zma-u.5   100216900   haloacid dehalogenase (HAD) superfamily protein 
 tae-r.2   123062296   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 tae-r.2   123071059   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 tae-r.2   123079430   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 hvu-r.1   123444610   phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial 
 sbi-r.1   110433898   uncharacterized protein YqeG 
 bdi-r.1   100833668   uncharacterized LOC100833668 
 cre-r.1   CHLRE_04g219900v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G58830 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G58830 (ath-u.5 coexpression data)

CoexMap"825052"


athAT3G58830 | Entrez gene ID : 825052      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 2 2 2 2 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00564 [list] [network] Glycerophospholipid metabolism (99 genes)
GO BP
GO:0006655 [list] [network] phosphatidylglycerol biosynthetic process  (6 genes)  IEA IMP  
GO:0046839 [list] [network] phospholipid dephosphorylation  (20 genes)  IDA  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO:0046486 [list] [network] glycerolipid metabolic process  (91 genes)  IDA  
GO:0015979 [list] [network] photosynthesis  (154 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO:0008610 [list] [network] lipid biosynthetic process  (413 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA ISM  
GO MF
GO:0008962 [list] [network] phosphatidylglycerophosphatase activity  (3 genes)  IDA IMP  
Protein NP_001326922.1 [sequence] [blastp]
NP_001326923.1 [sequence] [blastp]
NP_191442.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for NP_001326922.1)
chlo 9  (predict for NP_001326923.1)
chlo 9,  chlo_mito 5  (predict for NP_191442.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001326922.1)
chlo 9  (predict for NP_001326923.1)
chlo 9  (predict for NP_191442.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G58830
ath-r.7
for
AT3G58830
ath-m.9
for
AT3G58830
ath-e.2
for
AT3G58830
ath-m.4.bio
for
AT3G58830
ath-m.4.hor
for
AT3G58830
ath-m.4.lig
for
AT3G58830
ath-m.4.str
for
AT3G58830
ath-m.4.tis
for
AT3G58830
bra-r.6
for
103830186
bna-r.1
for
106353171
bna-r.1
for
106428252
ghi-r.1
for
107959668
ghi-r.1
for
107959716
cit-r.1
for
102624238
gma-u.5
for
100820364
vvi-u.5
for
100252338
ppo-u.5
for
7464795
ppo-u.5
for
7480730
mtr-u.5
for
25483052
mtr-u.5
for
11435953
sly-u.5
for
101261489
sly-u.5
for
101255115
sot-r.1
for
102595000
sot-r.1
for
102598279
nta-r.1
for
107795273
nta-r.1
for
107790298
nta-r.1
for
107786118
osa-u.5
for
4325633
zma-u.5
for
100216900
tae-r.2
for
123062296
tae-r.2
for
123071059
tae-r.2
for
123079430
hvu-r.1
for
123444610
sbi-r.1
for
110433898
bdi-r.1
for
100833668
cre-r.1
for
CHLRE_04g219900v5


Ortholog ID: 7630
Species ath bra bna bna ghi ghi cit gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT3G58830 LOC103830186 LOC106353171 LOC106428252 LOC107959668 LOC107959716 LOC102624238 LOC100820364 LOC100252338 LOC7464795 LOC7480730 LOC25483052 LOC11435953 LOC101261489 LOC101255115 LOC102595000 LOC102598279 LOC107795273 LOC107786118 LOC142161786 LOC4325633 LOC100216900 LOC123062296 LOC123071059 LOC123079430 LOC123444610 LOC110433898 LOC100833668 CHLRE_04g219900v5
Function* haloacid dehalogenase (HAD) superfamily protein uncharacterized LOC103830186 phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial-like phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial uncharacterized LOC100820364 phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial-like phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial uncharacterized LOC102595000 uncharacterized LOC102598279 phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial-like phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial haloacid dehalogenase (HAD) superfamily protein phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial uncharacterized protein YqeG uncharacterized LOC100833668 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi01240 Biosynthesis of cofactors 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi01240 Biosynthesis of cofactors 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00860 Porphyrin metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr00564 Glycerophospholipid metabolism 2
mtr00240 Pyrimidine metabolism 2
mtr00670 One carbon pool by folate 2
mtr00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta03010 Ribosome 2
nta00564 Glycerophospholipid metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
nta00195 Photosynthesis 2
nta00564 Glycerophospholipid metabolism 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
osa00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 2
zma00270 Cysteine and methionine metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00730 Thiamine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
tae00730 Thiamine metabolism 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00730 Thiamine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825052 103830186 106353171 106428252 107959668 107959716 102624238 100820364 100252338 7464795 7480730 25483052 11435953 101261489 101255115 102595000 102598279 107795273 107786118 142161786 4325633 100216900 123062296 123071059 123079430 123444610 110433898 100833668 5717852
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