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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PME61   pectin methylesterase 61 
 ath-r.7   PME61   pectin methylesterase 61 
 ath-m.9   PME61   pectin methylesterase 61 
 ath-e.2   PME61   pectin methylesterase 61 
 ath-m.4.bio   PME61   pectin methylesterase 61 
 ath-m.4.hor   PME61   pectin methylesterase 61 
 ath-m.4.lig   PME61   pectin methylesterase 61 
 ath-m.4.str   PME61   pectin methylesterase 61 
 ath-m.4.tis   PME61   pectin methylesterase 61 
 ath-u.5   ATPMEPCRD   Plant invertase/pectin methylesterase inhibitor superfamily 
 bra-r.6   103866689   probable pectinesterase/pectinesterase inhibitor 16 
 bra-r.6   103866037   probable pectinesterase/pectinesterase inhibitor 16 
 bra-r.6   103862956   probable pectinesterase/pectinesterase inhibitor 35 
 bna-r.1   106351635   probable pectinesterase/pectinesterase inhibitor 16 
 bna-r.1   106368312   probable pectinesterase/pectinesterase inhibitor 35 
 bna-r.1   106391703   probable pectinesterase/pectinesterase inhibitor 16 
 vvi-u.5   100244703   probable pectinesterase/pectinesterase inhibitor 35 
 ppo-u.5   7468487   probable pectinesterase/pectinesterase inhibitor 35 
 osa-u.5   4330938   probable pectinesterase/pectinesterase inhibitor 35 
 zma-u.5   100281856   pectinesterase-2 
 tae-r.2   123145798   pectinesterase 
 tae-r.2   123145802   pectinesterase 
 tae-r.2   123134748   pectinesterase 

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Top 50 coexpressed genes to PME61 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PME61 (ath-u.5 coexpression data)

CoexMap"825070"


athPME61 | Entrez gene ID : 825070      
Species ath bra bna vvi ppo osa zma tae sbi ghi cre mtr sly cit sot bdi gma nta hvu
Paralog 10 3 3 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042545 [list] [network] cell wall modification  (164 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0030599 [list] [network] pectinesterase activity  (17 genes)  IMP  
Protein NP_191460.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  mito 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_191460.1)
Subcellular
localization
TargetP
scret 2  (predict for NP_191460.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PME61
ath-r.7
for
PME61
ath-m.9
for
PME61
ath-e.2
for
PME61
ath-m.4.bio
for
PME61
ath-m.4.hor
for
PME61
ath-m.4.lig
for
PME61
ath-m.4.str
for
PME61
ath-m.4.tis
for
PME61
ath-u.5
for
ATPMEPCRD
bra-r.6
for
103866689
bra-r.6
for
103866037
bra-r.6
for
103862956
bna-r.1
for
106351635
bna-r.1
for
106368312
bna-r.1
for
106391703
vvi-u.5
for
100244703
ppo-u.5
for
7468487
osa-u.5
for
4330938
zma-u.5
for
100281856
tae-r.2
for
123145798
tae-r.2
for
123145802
tae-r.2
for
123134748


Ortholog ID: 8915
Species ath ath bra bra bra bna bna bna vvi ppo osa zma tae tae tae
Symbol PME61 ATPMEPCRD LOC103866689 LOC103866037 LOC103862956 LOC106351635 LOC106368312 LOC106415373 LOC100244703 LOC7468487 LOC4330938 LOC100281856 LOC123145798 LOC123145802 LOC123134748
Function* pectin methylesterase 61 Plant invertase/pectin methylesterase inhibitor superfamily probable pectinesterase/pectinesterase inhibitor 16 probable pectinesterase/pectinesterase inhibitor 16 probable pectinesterase/pectinesterase inhibitor 35 probable pectinesterase/pectinesterase inhibitor 16 probable pectinesterase/pectinesterase inhibitor 35 probable pectinesterase/pectinesterase inhibitor 35 probable pectinesterase/pectinesterase inhibitor 35 probable pectinesterase/pectinesterase inhibitor 35 probable pectinesterase/pectinesterase inhibitor 35 pectinesterase-2 pectinesterase pectinesterase pectinesterase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 3
bra00940 Phenylpropanoid biosynthesis 2
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00062 Fatty acid elongation 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 3
zma00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825070 818907 103866689 103866037 103862956 106351635 106368312 106415373 100244703 7468487 4330938 100281856 123145798 123145802 123134748
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