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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G59780   Rhodanese/Cell cycle control phosphatase superfamily protein 
 ath-r.7   AT3G59780   Rhodanese/Cell cycle control phosphatase superfamily protein 
 ath-e.2   AT3G59780   Rhodanese/Cell cycle control phosphatase superfamily protein 
 bra-r.6   103830228   uncharacterized LOC103830228 
 bna-r.1   106353143   uncharacterized LOC106353143 
 bna-r.1   106405843   uncharacterized LOC106405843 
 ghi-r.1   107928502   uncharacterized LOC107928502 
 ghi-r.1   107943623   calcium sensing receptor, chloroplastic 
 ghi-r.1   107914595   calcium sensing receptor, chloroplastic 
 cit-r.1   102623612   calcium sensing receptor, chloroplastic 
 gma-u.5   100786142   calcium sensing receptor, chloroplastic 
 gma-u.5   100786123   uncharacterized LOC100786123 
 vvi-u.5   100249037   uncharacterized LOC100249037 
 ppo-u.5   18104603   calcium sensing receptor, chloroplastic 
 mtr-u.5   11444160   calcium sensing receptor, chloroplastic 
 sly-u.5   101256951   uncharacterized LOC101256951 
 sot-r.1   102578168   uncharacterized LOC102578168 
 nta-r.1   107828060   uncharacterized LOC107828060 
 nta-r.1   107803555   uncharacterized LOC107803555 
 osa-u.5   4325097   uncharacterized LOC4325097 
 zma-u.5   100501574   Rhodanese/Cell cycle control phosphatase superfamily protein 
 tae-r.2   123076411   uncharacterized LOC123076411 
 tae-r.2   123071718   uncharacterized LOC123071718 
 tae-r.2   123057076   uncharacterized LOC123057076 
 hvu-r.1   123442026   uncharacterized LOC123442026 
 sbi-r.1   8056105   uncharacterized LOC8056105 
 bdi-r.1   100830508   uncharacterized LOC100830508 
 cre-r.1   CHLRE_05g247450v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G59780 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G59780 (ath-u.5 coexpression data)

CoexMap"825147"


athAT3G59780 | Entrez gene ID : 825147      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071277 [list] [network] cellular response to calcium ion  (3 genes)  IEA  
GO:0009704 [list] [network] de-etiolation  (18 genes)  IEA  
GO:0090333 [list] [network] regulation of stomatal closure  (43 genes)  IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
Protein NP_191537.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_191537.4)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for NP_191537.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G59780
ath-r.7
for
AT3G59780
ath-e.2
for
AT3G59780
bra-r.6
for
103830228
bna-r.1
for
106353143
bna-r.1
for
106405843
ghi-r.1
for
107928502
ghi-r.1
for
107943623
ghi-r.1
for
107914595
cit-r.1
for
102623612
gma-u.5
for
100786142
gma-u.5
for
100786123
vvi-u.5
for
100249037
ppo-u.5
for
18104603
mtr-u.5
for
11444160
sly-u.5
for
101256951
sot-r.1
for
102578168
nta-r.1
for
107828060
nta-r.1
for
107803555
osa-u.5
for
4325097
zma-u.5
for
100501574
tae-r.2
for
123076411
tae-r.2
for
123071718
tae-r.2
for
123057076
hvu-r.1
for
123442026
sbi-r.1
for
8056105
bdi-r.1
for
100830508
cre-r.1
for
CHLRE_05g247450v5


Ortholog ID: 8064
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT3G59780 LOC103830228 LOC106353143 LOC106405843 LOC107928502 LOC107914595 LOC107896772 LOC102623612 LOC100786142 LOC100786123 LOC100249037 LOC18104603 LOC11444160 LOC101256951 LOC102578168 LOC107828060 LOC107803555 LOC4325097 LOC100501574 LOC123076411 LOC123071718 LOC123057076 LOC123442026 LOC8056105 LOC100830508 CHLRE_05g247450v5
Function* Rhodanese/Cell cycle control phosphatase superfamily protein uncharacterized LOC103830228 uncharacterized LOC106353143 uncharacterized LOC106405843 uncharacterized LOC107928502 calcium sensing receptor, chloroplastic calcium sensing receptor, chloroplastic calcium sensing receptor, chloroplastic calcium sensing receptor, chloroplastic uncharacterized LOC100786123 uncharacterized LOC100249037 calcium sensing receptor, chloroplastic calcium sensing receptor, chloroplastic uncharacterized LOC101256951 uncharacterized LOC102578168 uncharacterized LOC107828060 uncharacterized LOC107803555 uncharacterized LOC4325097 Rhodanese/Cell cycle control phosphatase superfamily protein uncharacterized LOC123076411 uncharacterized LOC123071718 uncharacterized LOC123057076 uncharacterized LOC123442026 uncharacterized LOC8056105 uncharacterized LOC100830508 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 3
sly00195 Photosynthesis 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 5
sot00710 Carbon fixation by Calvin cycle 4
sot01230 Biosynthesis of amino acids 4
sot00010 Glycolysis / Gluconeogenesis 3
sot00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 4
osa00010 Glycolysis / Gluconeogenesis 2
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00030 Pentose phosphate pathway 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 5
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 6
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 5
hvu00195 Photosynthesis 2
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi01200 Carbon metabolism 3
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 3
cre03040 Spliceosome 2
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825147 103830228 106353143 106405843 107928502 107914595 107896772 102623612 100786142 100786123 100249037 18104603 11444160 101256951 102578168 107828060 107803555 4325097 100501574 123076411 123071718 123057076 123442026 8056105 100830508 5726487
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