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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G60310   acyl-CoA synthetase family protein 
 ath-r.7   AT3G60310   acyl-CoA synthetase family protein 
 ath-m.9   AT3G60310   acyl-CoA synthetase family protein 
 ath-e.2   AT3G60310   acyl-CoA synthetase family protein 
 ath-m.4.bio   AT3G60310   acyl-CoA synthetase family protein 
 ath-m.4.hor   AT3G60310   acyl-CoA synthetase family protein 
 ath-m.4.lig   AT3G60310   acyl-CoA synthetase family protein 
 ath-m.4.str   AT3G60310   acyl-CoA synthetase family protein 
 ath-m.4.tis   AT3G60310   acyl-CoA synthetase family protein 
 bra-r.6   103862891   uncharacterized LOC103862891 
 bna-r.1   106445102   uncharacterized LOC106445102 
 bna-r.1   106391921   uncharacterized LOC106391921 
 ghi-r.1   121231945   uncharacterized LOC121231945 
 ghi-r.1   107932239   uncharacterized LOC107932239 
 vvi-u.5   100266211   uncharacterized LOC100266211 
 ppo-u.5   7497591   uncharacterized LOC7497591 
 sly-u.5   101246446   uncharacterized LOC101246446 
 nta-r.1   107826183   uncharacterized LOC107826183 
 nta-r.1   107813785   uncharacterized LOC107813785 
 osa-u.5   107278192   uncharacterized LOC107278192 
 zma-u.5   103638084   uncharacterized LOC103638084 
 tae-r.2   123151394   uncharacterized LOC123151394 
 sbi-r.1   8071316   uncharacterized LOC8071316 

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Top 50 coexpressed genes to AT3G60310 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G60310 (ath-u.5 coexpression data)

CoexMap"825202"


athAT3G60310 | Entrez gene ID : 825202      
Species ath bra bna ghi vvi ppo sly nta osa zma tae sbi gma hvu mtr bdi cit sot cre
Paralog 9 1 2 2 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010705 [list] [network] meiotic DNA double-strand break processing involved in reciprocal meiotic recombination  (3 genes)  IMP  
GO CC
GO MF
Protein NP_001319804.1 [sequence] [blastp]
NP_001327463.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 1,  plas 1,  cysk_nucl 1,  cyto_plas 1  (predict for NP_001319804.1)
chlo 4,  nucl 3,  cyto 1,  plas 1,  cysk_nucl 1,  cyto_plas 1  (predict for NP_001327463.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001319804.1)
other 4  (predict for NP_001327463.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G60310
ath-r.7
for
AT3G60310
ath-m.9
for
AT3G60310
ath-e.2
for
AT3G60310
ath-m.4.bio
for
AT3G60310
ath-m.4.hor
for
AT3G60310
ath-m.4.lig
for
AT3G60310
ath-m.4.str
for
AT3G60310
ath-m.4.tis
for
AT3G60310
bra-r.6
for
103862891
bna-r.1
for
106445102
bna-r.1
for
106391921
ghi-r.1
for
121231945
ghi-r.1
for
107932239
vvi-u.5
for
100266211
ppo-u.5
for
7497591
sly-u.5
for
101246446
nta-r.1
for
107826183
nta-r.1
for
107813785
osa-u.5
for
107278192
zma-u.5
for
103638084
tae-r.2
for
123151394
sbi-r.1
for
8071316


Ortholog ID: 11350
Species ath bra bna bna ghi ghi vvi ppo sly nta nta osa zma tae sbi
Symbol AT3G60310 LOC103862891 LOC106445102 LOC106391921 LOC121231945 LOC107932239 LOC100266211 LOC7497591 LOC101246446 LOC107826183 LOC107813785 LOC107278192 LOC103638084 LOC123151394 LOC8071316
Function* acyl-CoA synthetase family protein uncharacterized LOC103862891 uncharacterized LOC106445102 uncharacterized LOC106391921 uncharacterized LOC121231945 uncharacterized LOC107932239 uncharacterized LOC100266211 uncharacterized LOC7497591 uncharacterized LOC101246446 uncharacterized LOC107826183 uncharacterized LOC107813785 uncharacterized LOC107278192 uncharacterized LOC103638084 uncharacterized LOC123151394 uncharacterized LOC8071316
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 3
bra03460 Fanconi anemia pathway 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 2
sly03450 Non-homologous end-joining 2
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 4
nta03460 Fanconi anemia pathway 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
zma03020 RNA polymerase 2
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825202 103862891 106445102 106391921 121231945 107932239 100266211 7497591 101246446 107826183 107813785 107278192 103638084 123151394 8071316
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