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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   STK   K-box region and MADS-box transcription factor family protein 
 ath-r.7   STK   K-box region and MADS-box transcription factor family protein 
 ath-m.9   STK   K-box region and MADS-box transcription factor family protein 
 ath-e.2   STK   K-box region and MADS-box transcription factor family protein 
 ath-m.4.bio   STK   K-box region and MADS-box transcription factor family protein 
 ath-m.4.hor   STK   K-box region and MADS-box transcription factor family protein 
 ath-m.4.lig   STK   K-box region and MADS-box transcription factor family protein 
 ath-m.4.str   STK   K-box region and MADS-box transcription factor family protein 
 ath-m.4.tis   STK   K-box region and MADS-box transcription factor family protein 
 ath-u.5   AG   K-box region and MADS-box transcription factor family protein 
 ath-u.5   SHP1   K-box region and MADS-box transcription factor family protein 
 bra-r.6   103856965   floral homeotic protein AGAMOUS 
 bna-r.1   106436444   agamous-like MADS-box protein AGL11 
 bna-r.1   106428192   agamous-like MADS-box protein AGL1 
 bna-r.1   106444428   floral homeotic protein AGAMOUS-like 
 ghi-r.1   107957499   agamous-like MADS-box protein AGL11 
 ghi-r.1   107904906   agamous-like MADS-box protein AGL11 
 ghi-r.1   107914052   agamous-like MADS-box protein AGL11 
 cit-r.1   102617808   agamous-like MADS-box protein MADS1 
 cit-r.1   102620453   agamous-like MADS-box protein AGL11 
 gma-u.5   100782733   agamous-like MADS-box protein MADS1 
 gma-u.5   AGL1   agamous-like MADS-box protein AGL1 
 gma-u.5   732595   MADS-box protein 
 vvi-u.5   MADS5   MADS-box protein 5 
 vvi-u.5   AG   agamous 
 vvi-u.5   MADS1   MAD-box transcripion factor 
 sly-u.5   MBP3   agamous-like MADS-box protein MBP3 
 sly-u.5   TAGL1   TAGL1 transcription factor 
 sot-r.1   102586087   floral homeotic protein AGAMOUS 
 nta-r.1   107777063   agamous-like MADS-box protein AGL11 
 osa-u.5   4338067   MADS-box transcription factor 58-like 
 osa-u.5   9271572   MADS-box transcription factor 3-like 
 zma-u.5   100037764   AGAMOUS-like protein 
 zma-u.5   542037   Agamous-like MADS-box protein AGL5 
 zma-u.5   542244   homologue of Arabidopsis gene AGAMOUS 
 tae-r.2   123041886   MADS-box transcription factor 58 
 tae-r.2   123077697   MADS-box transcription factor 3 
 tae-r.2   100136964   MADS-box transcription factor 21 
 sbi-r.1   110430121   MADS-box transcription factor 3-like 
 sbi-r.1   8080509   MADS-box transcription factor 3 
 bdi-r.1   100824190   MADS-box transcription factor 58-like 
 bdi-r.1   100841720   MADS-box transcription factor 3 

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Top 50 coexpressed genes to STK (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to STK (ath-u.5 coexpression data)

CoexMap"826586"


athSTK | Entrez gene ID : 826586      
Species ath bra bna ghi cit gma vvi sly sot nta osa zma tae sbi bdi mtr cre hvu ppo
Paralog 11 1 3 3 2 3 3 2 1 1 2 3 3 2 2 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080155 [list] [network] regulation of double fertilization forming a zygote and endosperm  (11 genes)  IGI  
GO:0080060 [list] [network] integument development  (12 genes)  IGI  
GO:0010214 [list] [network] seed coat development  (51 genes)  IMP  
GO:0048481 [list] [network] plant ovule development  (68 genes)  IGI IMP  
GO:0051302 [list] [network] regulation of cell division  (78 genes)  IGI  
GO:0048440 [list] [network] carpel development  (94 genes)  IMP  
GO:0071669 [list] [network] plant-type cell wall organization or biogenesis  (258 genes)  IMP  
GO:0048316 [list] [network] seed development  (775 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IMP ISS  
GO CC
GO:0090397 [list] [network] stigma papilla  (2 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000987 [list] [network] cis-regulatory region sequence-specific DNA binding  (55 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IDA IMP ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IDA IPI  
Protein NP_001078364.1 [sequence] [blastp]
NP_001319889.1 [sequence] [blastp]
NP_001329611.1 [sequence] [blastp]
NP_001329612.1 [sequence] [blastp]
NP_192734.1 [sequence] [blastp]
NP_849351.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001078364.1)
extr 4,  nucl 1,  vacu 1,  chlo 1,  cyto 1,  plas 1,  E.R. 1,  cysk_nucl 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001319889.1)
nucl 9,  cyto_nucl 5  (predict for NP_001329611.1)
nucl 10  (predict for NP_001329612.1)
nucl 10  (predict for NP_192734.1)
nucl 9  (predict for NP_849351.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for NP_001078364.1)
other 2  (predict for NP_001319889.1)
other 7  (predict for NP_001329611.1)
other 9  (predict for NP_001329612.1)
other 9  (predict for NP_192734.1)
other 9  (predict for NP_849351.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
STK
ath-r.7
for
STK
ath-m.9
for
STK
ath-e.2
for
STK
ath-m.4.bio
for
STK
ath-m.4.hor
for
STK
ath-m.4.lig
for
STK
ath-m.4.str
for
STK
ath-m.4.tis
for
STK
ath-u.5
for
AG
ath-u.5
for
SHP1
bra-r.6
for
103856965
bna-r.1
for
106436444
bna-r.1
for
106428192
bna-r.1
for
106444428
ghi-r.1
for
107957499
ghi-r.1
for
107904906
ghi-r.1
for
107914052
cit-r.1
for
102617808
cit-r.1
for
102620453
gma-u.5
for
100782733
gma-u.5
for
AGL1
gma-u.5
for
732595
vvi-u.5
for
MADS5
vvi-u.5
for
AG
vvi-u.5
for
MADS1
sly-u.5
for
MBP3
sly-u.5
for
TAGL1
sot-r.1
for
102586087
nta-r.1
for
107777063
osa-u.5
for
4338067
osa-u.5
for
9271572
zma-u.5
for
100037764
zma-u.5
for
542037
zma-u.5
for
542244
tae-r.2
for
123041886
tae-r.2
for
123077697
tae-r.2
for
100136964
sbi-r.1
for
110430121
sbi-r.1
for
8080509
bdi-r.1
for
100824190
bdi-r.1
for
100841720


Ortholog ID: 775
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi sly sly sly nta osa osa osa zma zma zma tae tae tae sbi sbi bdi bdi
Symbol STK SHP1 LOC103856965 LOC103861026 LOC103866661 LOC106428192 LOC106353173 LOC106397223 LOC107904906 LOC107914052 LOC107959674 LOC102620453 LOC102622291 LOC100776263 AGL11 LOC100808734 MADS5 AG MADS1 MBP3 TAGL1 AG1 LOC107777063 LOC4338067 LOC9271572 LOC4324888 LOC542037 LOC542244 LOC542039 LOC100136964 LOC100136965 LOC100136998 LOC110430121 LOC8080509 LOC100824190 LOC100841720
Function* K-box region and MADS-box transcription factor family protein K-box region and MADS-box transcription factor family protein floral homeotic protein AGAMOUS floral homeotic protein AGAMOUS agamous-like MADS-box protein AGL5 agamous-like MADS-box protein AGL1 agamous-like MADS-box protein AGL1 agamous-like MADS-box protein AGL11 agamous-like MADS-box protein AGL11 agamous-like MADS-box protein AGL11 agamous-like MADS-box protein MADS1 agamous-like MADS-box protein AGL11 agamous-like MADS-box protein MADS1 floral homeotic protein AGAMOUS-like MADS domain transporter AGL11 agamous-like MADS-box protein MADS1 MADS-box protein 5 agamous MAD-box transcripion factor agamous-like MADS-box protein MBP3 TAGL1 transcription factor floral homeotic protein AGAMOUS agamous-like MADS-box protein AGL11 MADS-box transcription factor 58-like MADS-box transcription factor 3-like MADS-box transcription factor 21-like Agamous-like MADS-box protein AGL5 homologue of Arabidopsis gene AGAMOUS MADS-box transcription factor 21 MADS-box transcription factor 21 MADS-box transcription factor 3 MADS-box transcription factor 21 MADS-box transcription factor 3-like MADS-box transcription factor 3 MADS-box transcription factor 58-like MADS-box transcription factor 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 3
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00640 Propanoate metabolism 2
ghi00785 Lipoic acid metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00062 Fatty acid elongation 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00053 Ascorbate and aldarate metabolism 2
zma00071 Fatty acid degradation 2
zma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
bdi00941 Flavonoid biosynthesis 2
bdi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826586 825047 103856965 103861026 103866661 106428192 106353173 106397223 107904906 107914052 107959674 102620453 102622291 100776263 100301905 100808734 100232870 100261787 100232864 101249093 543841 543840 107777063 4338067 9271572 4324888 542037 542244 542039 100136964 100136965 100136998 110430121 8080509 100824190 100841720
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