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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT4G11400   ARID/BRIGHT DNA-binding, ELM2 domain and myb-like DNA-binding domain-containing protein 
 ath-m.4.bio   AT4G11400   ARID/BRIGHT DNA-binding, ELM2 domain and myb-like DNA-binding domain-containing protein 
 ath-m.4.hor   AT4G11400   ARID/BRIGHT DNA-binding, ELM2 domain and myb-like DNA-binding domain-containing protein 
 ath-m.4.lig   AT4G11400   ARID/BRIGHT DNA-binding, ELM2 domain and myb-like DNA-binding domain-containing protein 
 ath-m.4.str   AT4G11400   ARID/BRIGHT DNA-binding, ELM2 domain and myb-like DNA-binding domain-containing protein 
 ath-m.4.tis   AT4G11400   ARID/BRIGHT DNA-binding, ELM2 domain and myb-like DNA-binding domain-containing protein 
 ath-u.5   AT2G46040   ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein 
 gma-u.5   100816021   AT-rich interactive domain-containing protein 2 
 gma-u.5   100780550   AT-rich interactive domain-containing protein 1 
 gma-u.5   100779445   AT-rich interactive domain-containing protein 1 
 vvi-u.5   100265458   AT-rich interactive domain-containing protein 1 
 vvi-u.5   100245040   AT-rich interactive domain-containing protein 2 
 ppo-u.5   7494094   AT-rich interactive domain-containing protein 2 
 ppo-u.5   7458186   AT-rich interactive domain-containing protein 2 
 ppo-u.5   7457349   AT-rich interactive domain-containing protein 2 
 mtr-u.5   11435600   AT-rich interactive domain-containing protein 2 
 mtr-u.5   25484375   AT-rich interactive domain-containing protein 2 
 mtr-u.5   25484364   AT-rich interactive domain-containing protein 2 
 sly-u.5   101256091   AT-rich interactive domain-containing protein 1-like 
 sly-u.5   101263855   AT-rich interactive domain-containing protein 1 
 sly-u.5   101252909   AT-rich interactive domain-containing protein 2 
 osa-u.5   4335051   AT-rich interactive domain-containing protein 2 
 zma-u.5   103641401   AT-rich interactive domain-containing protein 2 

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Top 50 coexpressed genes to AT4G11400 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G11400 (ath-m.9 coexpression data)

CoexMap"826744"


athAT4G11400 | Entrez gene ID : 826744      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 7 3 2 3 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0000118 [list] [network] histone deacetylase complex  (44 genes)  IDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001319902.1 [sequence] [blastp]
NP_192879.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001319902.1)
nucl 9  (predict for NP_192879.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for NP_001319902.1)
other 8,  scret 3  (predict for NP_192879.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT4G11400

.
ath-m.4.bio
for
AT4G11400

.
ath-m.4.hor
for
AT4G11400

.
ath-m.4.lig
for
AT4G11400

.
ath-m.4.str
for
AT4G11400

.
ath-m.4.tis
for
AT4G11400

.
ath-u.5
for
AT2G46040

.
gma-u.5
for
100816021

.
gma-u.5
for
100780550

.
gma-u.5
for
100779445

.
vvi-u.5
for
100265458

.
vvi-u.5
for
100245040

.
ppo-u.5
for
7494094

.
ppo-u.5
for
7458186

.
ppo-u.5
for
7457349

.
mtr-u.5
for
11435600

.
mtr-u.5
for
25484375

.
mtr-u.5
for
25484364

.
sly-u.5
for
101256091

.
sly-u.5
for
101263855

.
sly-u.5
for
101252909

.
osa-u.5
for
4335051

.
zma-u.5
for
103641401

.


Ortholog ID: 1850
Species ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT2G46040 LOC100780550 LOC106796347 LOC101252909 LOC101267851 LOC4335051 LOC103641401 LOC103833874 LOC103866944 LOC100245040 LOC100265458 LOC7457349 LOC7472756 LOC25484364 LOC11435600 LOC123050919 LOC123186879 LOC123428994 LOC121220369 LOC121219110 LOC106422282 LOC106394253 LOC8083400 LOC102584594 LOC102603893 LOC102625065 LOC102610655 LOC100832413 LOC107777804 LOC107824439
Function* ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein AT-rich interactive domain-containing protein 1 AT-rich interactive domain-containing protein 1-like AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 1-like AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 1 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 1 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 2-like AT-rich interactive domain-containing protein 2-like AT-rich interactive domain-containing protein 1 AT-rich interactive domain-containing protein 2-like AT-rich interactive domain-containing protein 1-like AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 1-like AT-rich interactive domain-containing protein 1-like AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 1 AT-rich interactive domain-containing protein 2 AT-rich interactive domain-containing protein 1-like AT-rich interactive domain-containing protein 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 4
ath03440 Homologous recombination 4
ath03030 DNA replication 4
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 5
gma03040 Spliceosome 5
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00710 Carbon fixation by Calvin cycle 4
sly01230 Biosynthesis of amino acids 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 3
bra03010 Ribosome 3
bra03040 Spliceosome 2
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot04626 Plant-pathogen interaction 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 7
nta03250 Viral life cycle - HIV-1 4
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819212 100780550 106796347 101252909 101267851 4335051 103641401 103833874 103866944 100245040 100265458 7457349 7472756 25484364 11435600 123050919 123186879 123428994 121220369 121219110 106422282 106394253 8083400 102584594 102603893 102625065 102610655 100832413 107777804 107824439
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