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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PLDGAMMA1   phospholipase D gamma 1 
 ath-r.7   PLDGAMMA1   phospholipase D gamma 1 
 ath-m.9   PLDGAMMA1   phospholipase D gamma 1 
 ath-e.2   PLDGAMMA1   phospholipase D gamma 1 
 ath-m.4.bio   PLDGAMMA1   phospholipase D gamma 1 
 ath-m.4.hor   PLDGAMMA1   phospholipase D gamma 1 
 ath-m.4.lig   PLDGAMMA1   phospholipase D gamma 1 
 ath-m.4.str   PLDGAMMA1   phospholipase D gamma 1 
 ath-m.4.tis   PLDGAMMA1   phospholipase D gamma 1 
 ath-u.5   PLDBETA1   phospholipase D beta 1 
 ath-u.5   PLDBETA2   phospholipase D beta 2 
 ath-u.5   PLDGAMMA2   phospholipase D gamma 2 
 bra-r.6   103853306   phospholipase D beta 2 
 bra-r.6   103828818   phospholipase D gamma 1 
 bra-r.6   103844688   phospholipase D beta 1 
 bna-r.1   106388197   phospholipase D beta 2 
 bna-r.1   106367016   phospholipase D gamma 1 
 bna-r.1   106358393   phospholipase D beta 1 
 ghi-r.1   107930070   phospholipase D gamma 1 
 ghi-r.1   107927004   phospholipase D gamma 1 
 cit-r.1   102578045   phospholipase D gamma 
 cit-r.1   102614125   phospholipase D beta 2-like 
 gma-u.5   100805294   phospholipase D gamma 1 
 gma-u.5   100786241   phospholipase D gamma 1 
 vvi-u.5   100250490   phospholipase D beta 2 
 vvi-u.5   100252995   phospholipase D beta 1-like 
 ppo-u.5   7490921   phospholipase D beta 1 
 ppo-u.5   7494030   phospholipase D beta 2 
 ppo-u.5   7496922   phospholipase D gamma 1 
 mtr-u.5   25500982   phospholipase D beta 2 
 mtr-u.5   11437516   phospholipase D beta 1 
 mtr-u.5   11428726   phospholipase D gamma 1 
 sly-u.5   PLDb2   phospholipase PLDb2 
 sly-u.5   PLDb1   phospholipase PLDb1 
 sot-r.1   102605359   phospholipase D gamma 1-like 
 sot-r.1   102600860   phospholipase D beta 1-like 
 sot-r.1   102599532   phospholipase D gamma 1-like 
 nta-r.1   107759472   phospholipase D beta 1 
 nta-r.1   107823262   phospholipase D gamma 1-like 
 nta-r.1   107780667   phospholipase D beta 1-like 
 osa-u.5   4349161   phospholipase D gamma 1 
 zma-u.5   100501678   phospholipase D family protein 
 zma-u.5   103626841   phospholipase D beta 1 
 tae-r.2   123181388   phospholipase D gamma 1 
 tae-r.2   123065510   phospholipase D beta 1 
 hvu-r.1   123435241   phospholipase D gamma 1-like 
 hvu-r.1   123448028   phospholipase D beta 1-like 
 sbi-r.1   8062892   phospholipase D gamma 1 
 bdi-r.1   100822244   phospholipase D beta 1 
 bdi-r.1   100821936   phospholipase D gamma 1 
 bdi-r.1   100844538   phospholipase D beta 1 

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Top 50 coexpressed genes to PLDGAMMA1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PLDGAMMA1 (ath-u.5 coexpression data)

CoexMap""


athPLDGAMMA1 | Entrez gene ID : 826791      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 2 2 2 2 3 3 2 3 3 1 2 2 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function phospholipase D gamma 1
KEGG ath00564 [list] [network] Glycerophospholipid metabolism (99 genes)
ath00565 [list] [network] Ether lipid metabolism (26 genes)
ath04144 [list] [network] Endocytosis (156 genes)
GO BP
GO:0010044 [list] [network] response to aluminum ion  (16 genes)  IMP  
GO:0006643 [list] [network] membrane lipid metabolic process  (69 genes)  IMP  
GO:0045087 [list] [network] innate immune response  (157 genes)  IDA  
GO:0042742 [list] [network] defense response to bacterium  (363 genes)  IGI  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA IDA  
GO MF
GO:0004630 [list] [network] phospholipase D activity  (12 genes)  IDA ISS  
GO:0005546 [list] [network] phosphatidylinositol-4,5-bisphosphate binding  (29 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_192922.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  vacu 1,  cysk 1  (predict for NP_192922.1)
Subcellular
localization
TargetP
other 8  (predict for NP_192922.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PLDGAMMA1
ath-r.7
for
PLDGAMMA1
ath-m.9
for
PLDGAMMA1
ath-e.2
for
PLDGAMMA1
ath-m.4.bio
for
PLDGAMMA1
ath-m.4.hor
for
PLDGAMMA1
ath-m.4.lig
for
PLDGAMMA1
ath-m.4.str
for
PLDGAMMA1
ath-m.4.tis
for
PLDGAMMA1
ath-u.5
for
PLDBETA1
ath-u.5
for
PLDBETA2
ath-u.5
for
PLDGAMMA2
bra-r.6
for
103853306
bra-r.6
for
103828818
bra-r.6
for
103844688
bna-r.1
for
106388197
bna-r.1
for
106367016
bna-r.1
for
106358393
ghi-r.1
for
107930070
ghi-r.1
for
107927004
cit-r.1
for
102578045
cit-r.1
for
102614125
gma-u.5
for
100805294
gma-u.5
for
100786241
vvi-u.5
for
100250490
vvi-u.5
for
100252995
ppo-u.5
for
7490921
ppo-u.5
for
7494030
ppo-u.5
for
7496922
mtr-u.5
for
25500982
mtr-u.5
for
11437516
mtr-u.5
for
11428726
sly-u.5
for
PLDb2
sly-u.5
for
PLDb1
sot-r.1
for
102605359
sot-r.1
for
102600860
sot-r.1
for
102599532
nta-r.1
for
107759472
nta-r.1
for
107823262
nta-r.1
for
107780667
osa-u.5
for
4349161
zma-u.5
for
100501678
zma-u.5
for
103626841
tae-r.2
for
123181388
tae-r.2
for
123065510
hvu-r.1
for
123435241
hvu-r.1
for
123448028
sbi-r.1
for
8062892
bdi-r.1
for
100822244
bdi-r.1
for
100821936
bdi-r.1
for
100844538

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Ortholog ID: 2329
Species ath ath ath bra bra bra bna bna bna ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa zma zma tae tae hvu hvu sbi bdi bdi bdi
Symbol PLDBETA1 PLDBETA2 PLDGAMMA2 LOC103853306 LOC103828818 LOC103844688 LOC106367016 LOC106370834 LOC106432327 LOC107930070 LOC107927004 LOC102578045 LOC102614125 LOC100805294 LOC100786241 LOC100250490 LOC100252995 LOC7490921 LOC7494030 LOC7496922 LOC25500982 LOC11437516 LOC11428726 PLDb2 PLDb1 LOC102605359 LOC102600860 LOC102599532 LOC107759472 LOC107780667 LOC107774768 LOC4349161 LOC100501678 LOC103626841 LOC123181388 LOC123182851 LOC123435241 LOC123448028 LOC8062892 LOC100822244 LOC100821936 LOC100844538
Function* phospholipase D beta 1 phospholipase D beta 2 phospholipase D gamma 2 phospholipase D beta 2 phospholipase D gamma 1 phospholipase D beta 1 phospholipase D gamma 1 phospholipase D beta 1 phospholipase D beta 2-like phospholipase D gamma 1 phospholipase D gamma 1 phospholipase D gamma phospholipase D beta 2-like phospholipase D gamma 1 phospholipase D gamma 1 phospholipase D beta 2 phospholipase D beta 1-like phospholipase D beta 1 phospholipase D beta 2 phospholipase D gamma 1 phospholipase D beta 2 phospholipase D beta 1 phospholipase D gamma 1 phospholipase PLDb2 phospholipase PLDb1 phospholipase D gamma 1-like phospholipase D beta 1-like phospholipase D gamma 1-like phospholipase D beta 1 phospholipase D beta 1-like phospholipase D gamma 1-like phospholipase D gamma 1 phospholipase D family protein phospholipase D beta 1 phospholipase D gamma 1 phospholipase D beta 1 phospholipase D gamma 1-like phospholipase D beta 1-like phospholipase D gamma 1 phospholipase D beta 1 phospholipase D gamma 1 phospholipase D beta 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath00565 Ether lipid metabolism 2
ath04144 Endocytosis 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
bra00565 Ether lipid metabolism 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 8
bna00565 Ether lipid metabolism 8
bna04144 Endocytosis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 5
bna00565 Ether lipid metabolism 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 3
bna00565 Ether lipid metabolism 3
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 3
ghi04626 Plant-pathogen interaction 2
ghi00592 alpha-Linolenic acid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 3
gma04382 Cornified envelope formation 3
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00760 Nicotinate and nicotinamide metabolism 2
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo04141 Protein processing in endoplasmic reticulum 2
ppo00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo02010 ABC transporters 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 5
mtr04075 Plant hormone signal transduction 4
mtr04016 MAPK signaling pathway - plant 3
mtr00564 Glycerophospholipid metabolism 2
mtr00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 4
mtr04075 Plant hormone signal transduction 3
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 5
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 4
sot01200 Carbon metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00591 Linoleic acid metabolism 3
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00591 Linoleic acid metabolism 2
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 3
zma01250 Biosynthesis of nucleotide sugars 3
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00514 Other types of O-glycan biosynthesis 3
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae04144 Endocytosis 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae04144 Endocytosis 3
tae00511 Other glycan degradation 3
tae00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
bdi00565 Ether lipid metabolism 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
bdi00564 Glycerophospholipid metabolism 2
bdi00565 Ether lipid metabolism 2
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818802 826673 826789 103853306 103828818 103844688 106367016 106370834 106432327 107930070 107927004 102578045 102614125 100805294 100786241 100250490 100252995 7490921 7494030 7496922 25500982 11437516 11428726 543821 544181 102605359 102600860 102599532 107759472 107780667 107774768 4349161 100501678 103626841 123181388 123182851 123435241 123448028 8062892 100822244 100821936 100844538
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