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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SPK1   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 
 ath-r.7   SPK1   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 
 ath-m.9   SPK1   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 
 ath-e.2   SPK1   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 
 ath-m.4.bio   SPK1   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 
 ath-m.4.hor   SPK1   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 
 ath-m.4.lig   SPK1   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 
 ath-m.4.str   SPK1   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 
 ath-m.4.tis   SPK1   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 
 bra-r.6   103869750   guanine nucleotide exchange factor SPIKE 1 
 bna-r.1   106360798   guanine nucleotide exchange factor SPIKE 1 
 bna-r.1   106367464   guanine nucleotide exchange factor SPIKE 1 
 ghi-r.1   107938242   guanine nucleotide exchange factor SPIKE 1 
 cit-r.1   102613047   guanine nucleotide exchange factor SPIKE 1 
 gma-u.5   100812785   guanine nucleotide exchange factor SPIKE 1 
 gma-u.5   100803721   guanine nucleotide exchange factor SPIKE 1 
 vvi-u.5   100259293   guanine nucleotide exchange factor SPIKE 1 
 ppo-u.5   7485423   guanine nucleotide exchange factor SPIKE 1 
 mtr-u.5   11405306   guanine nucleotide exchange factor SPIKE 1 
 sly-u.5   101262837   guanine nucleotide exchange factor SPIKE 1 
 sot-r.1   102590845   guanine nucleotide exchange factor SPIKE 1 
 nta-r.1   107798217   guanine nucleotide exchange factor SPIKE 1 
 nta-r.1   107801480   guanine nucleotide exchange factor SPIKE 1 
 osa-u.5   4332718   guanine nucleotide exchange factor SPIKE 1 
 zma-u.5   103639174   guanine nucleotide exchange factor SPIKE 1 
 zma-u.5   100273928   uncharacterized LOC100273928 
 tae-r.2   123092249   guanine nucleotide exchange factor SPIKE 1 
 tae-r.2   123097585   guanine nucleotide exchange factor SPIKE 1 
 tae-r.2   123085753   guanine nucleotide exchange factor SPIKE 1 
 hvu-r.1   123448743   guanine nucleotide exchange factor SPIKE 1 
 sbi-r.1   8084561   guanine nucleotide exchange factor SPIKE 1 
 bdi-r.1   100845304   guanine nucleotide exchange factor SPIKE 1 
 bdi-r.1   100836912   guanine nucleotide exchange factor SPIKE 1 

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Top 50 coexpressed genes to SPK1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SPK1 (ath-u.5 coexpression data)

CoexMap"827328"


athSPK1 | Entrez gene ID : 827328      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 1 1 2 1 1 1 1 1 2 1 2 3 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007264 [list] [network] small GTPase-mediated signal transduction  (1 genes)  IEA  
GO:0008360 [list] [network] regulation of cell shape  (9 genes)  IMP  
GO:0048446 [list] [network] petal morphogenesis  (12 genes)  IMP  
GO:0008064 [list] [network] regulation of actin polymerization or depolymerization  (13 genes)  IMP  
GO:0051211 [list] [network] anisotropic cell growth  (14 genes)  IMP  
GO:0009958 [list] [network] positive gravitropism  (41 genes)  IMP  
GO:0051493 [list] [network] regulation of cytoskeleton organization  (43 genes)  IMP  
GO:0010928 [list] [network] regulation of auxin mediated signaling pathway  (48 genes)  IMP  
GO:0043622 [list] [network] cortical microtubule organization  (50 genes)  IMP  
GO:0016192 [list] [network] vesicle-mediated transport  (246 genes)  IMP  
GO CC
GO:0070971 [list] [network] endoplasmic reticulum exit site  (4 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (24 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001319958.1 [sequence] [blastp]
NP_193367.7 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  nucl 1,  mito_plas 1,  plas 1,  cysk_nucl 1  (predict for NP_001319958.1)
chlo 4,  mito 2,  nucl 1,  mito_plas 1,  plas 1,  cysk_nucl 1  (predict for NP_193367.7)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for NP_001319958.1)
mito 6,  other 3  (predict for NP_193367.7)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
SPK1
ath-r.7
for
SPK1
ath-m.9
for
SPK1
ath-e.2
for
SPK1
ath-m.4.bio
for
SPK1
ath-m.4.hor
for
SPK1
ath-m.4.lig
for
SPK1
ath-m.4.str
for
SPK1
ath-m.4.tis
for
SPK1
bra-r.6
for
103869750
bna-r.1
for
106360798
bna-r.1
for
106367464
ghi-r.1
for
107938242
cit-r.1
for
102613047
gma-u.5
for
100812785
gma-u.5
for
100803721
vvi-u.5
for
100259293
ppo-u.5
for
7485423
mtr-u.5
for
11405306
sly-u.5
for
101262837
sot-r.1
for
102590845
nta-r.1
for
107798217
nta-r.1
for
107801480
osa-u.5
for
4332718
zma-u.5
for
103639174
zma-u.5
for
100273928
tae-r.2
for
123092249
tae-r.2
for
123097585
tae-r.2
for
123085753
hvu-r.1
for
123448743
sbi-r.1
for
8084561
bdi-r.1
for
100845304
bdi-r.1
for
100836912


Ortholog ID: 9583
Species ath bra bna bna ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi bdi
Symbol SPK1 LOC103869750 LOC106360798 LOC106367464 LOC107938242 LOC102613047 LOC100812785 LOC100803721 LOC100259293 LOC7485423 LOC11405306 LOC101262837 LOC102590845 LOC107798217 LOC107801480 LOC4332718 LOC103639174 LOC100273928 LOC123092249 LOC123097585 LOC123085753 LOC123448743 LOC8084561 LOC100845304 LOC100836912
Function* guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 uncharacterized LOC100273928 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1 guanine nucleotide exchange factor SPIKE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna00310 Lysine degradation 3
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna00310 Lysine degradation 3
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 6
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 6
nta04148 Efferocytosis 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta03082 ATP-dependent chromatin remodeling 4
nta04144 Endocytosis 2
nta05100 Bacterial invasion of epithelial cells 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827328 103869750 106360798 106367464 107938242 102613047 100812785 100803721 100259293 7485423 11405306 101262837 102590845 107798217 107801480 4332718 103639174 100273928 123092249 123097585 123085753 123448743 8084561 100845304 100836912
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