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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RLM3   disease resistance protein (TIR-NBS class) 
 ath-r.7   RLM3   disease resistance protein (TIR-NBS class) 
 ath-m.9   RLM3   disease resistance protein (TIR-NBS class) 
 ath-e.2   RLM3   disease resistance protein (TIR-NBS class) 
 ath-m.4.bio   RLM3   disease resistance protein (TIR-NBS class) 
 ath-m.4.hor   RLM3   disease resistance protein (TIR-NBS class) 
 ath-m.4.lig   RLM3   disease resistance protein (TIR-NBS class) 
 ath-m.4.str   RLM3   disease resistance protein (TIR-NBS class) 
 ath-m.4.tis   RLM3   disease resistance protein (TIR-NBS class) 
 ath-u.5   RPP4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-u.5   AT4G16957   SUPPRESSOR OF, CONSTITUTIVE protein 
 ath-u.5   AT4G16857   disease resistance protein (TIR-NBS-LRR class) family protein 

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Top 50 coexpressed genes to RLM3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RLM3 (ath-u.5 coexpression data)

CoexMap"827407"


athRLM3 | Entrez gene ID : 827407      
Species ath sly osa zma bna ghi gma sbi nta mtr cre bra cit vvi ppo hvu bdi sot tae
Paralog 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000071 [list] [network] regulation of defense response by callose deposition  (5 genes)  IMP  
GO:0009861 [list] [network] jasmonic acid and ethylene-dependent systemic resistance  (18 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (282 genes)  IMP  
GO:0006952 [list] [network] defense response  (1016 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (1102 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0061809 [list] [network] NAD+ nucleosidase activity, cyclic ADP-ribose generating  (32 genes)  IEA  
GO:0043531 [list] [network] ADP binding  (164 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001031652.1 [sequence] [blastp]
NP_001319972.1 [sequence] [blastp]
NP_001319973.1 [sequence] [blastp]
NP_001329871.1 [sequence] [blastp]
NP_001329872.1 [sequence] [blastp]
NP_001329873.1 [sequence] [blastp]
NP_001329874.1 [sequence] [blastp]
NP_001329875.1 [sequence] [blastp]
NP_001329876.1 [sequence] [blastp]
NP_001329877.1 [sequence] [blastp]
NP_001329878.1 [sequence] [blastp]
NP_001329879.1 [sequence] [blastp]
NP_001329880.1 [sequence] [blastp]
NP_001329881.1 [sequence] [blastp]
NP_001329882.1 [sequence] [blastp]
NP_001329883.1 [sequence] [blastp]
NP_193432.4 [sequence] [blastp]
NP_849399.1 [sequence] [blastp]
NP_849400.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001031652.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001319972.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001319973.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001329871.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001329872.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329873.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329874.1)
nucl 8,  cyto 1  (predict for NP_001329875.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001329876.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329877.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001329878.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001329879.1)
chlo 2,  nucl 2,  cyto 2,  cyto_nucl 2,  mito 1,  cysk 1  (predict for NP_001329880.1)
nucl 8,  chlo 1,  cyto 1,  vacu 1  (predict for NP_001329881.1)
nucl 8,  cyto 1  (predict for NP_001329882.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329883.1)
nucl 8,  cyto 1  (predict for NP_193432.4)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_849399.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_849400.2)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for NP_001031652.1)
other 6  (predict for NP_001319972.1)
other 7,  scret 3  (predict for NP_001319973.1)
other 7,  scret 3  (predict for NP_001329871.1)
other 7,  scret 3  (predict for NP_001329872.1)
other 6  (predict for NP_001329873.1)
other 6  (predict for NP_001329874.1)
other 6  (predict for NP_001329875.1)
other 7,  scret 3  (predict for NP_001329876.1)
other 6  (predict for NP_001329877.1)
other 7,  scret 3  (predict for NP_001329878.1)
other 7,  scret 3  (predict for NP_001329879.1)
other 8  (predict for NP_001329880.1)
other 8  (predict for NP_001329881.1)
other 6  (predict for NP_001329882.1)
other 6  (predict for NP_001329883.1)
other 6  (predict for NP_193432.4)
other 6  (predict for NP_849399.1)
other 7,  scret 3  (predict for NP_849400.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RLM3

.
ath-r.7
for
RLM3

.
ath-m.9
for
RLM3

.
ath-e.2
for
RLM3

.
ath-m.4.bio
for
RLM3

.
ath-m.4.hor
for
RLM3

.
ath-m.4.lig
for
RLM3

.
ath-m.4.str
for
RLM3

.
ath-m.4.tis
for
RLM3

.
ath-u.5
for
RPP4

.
ath-u.5
for
AT4G16957

.
ath-u.5
for
AT4G16857

.


Ortholog ID: 14034
Species ath ath bra
Symbol RPP4 AT4G16880 LOC103860884
Function* Disease resistance protein (TIR-NBS-LRR class) family Leucine-rich repeat (LRR) family protein protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827395 827396 103860884
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