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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   APRR2   CheY-like two-component responsive regulator family protein 
 ath-r.7   APRR2   CheY-like two-component responsive regulator family protein 
 ath-m.9   APRR2   CheY-like two-component responsive regulator family protein 
 ath-e.2   APRR2   CheY-like two-component responsive regulator family protein 
 ath-m.4.bio   APRR2   CheY-like two-component responsive regulator family protein 
 ath-m.4.hor   APRR2   CheY-like two-component responsive regulator family protein 
 ath-m.4.lig   APRR2   CheY-like two-component responsive regulator family protein 
 ath-m.4.str   APRR2   CheY-like two-component responsive regulator family protein 
 ath-m.4.tis   APRR2   CheY-like two-component responsive regulator family protein 
 gma-u.5   100779121   two-component response regulator-like APRR2 
 gma-u.5   100820385   two-component response regulator-like APRR2 
 gma-u.5   100784905   two-component response regulator-like APRR2 
 vvi-u.5   100250547   two-component response regulator-like APRR2 
 ppo-u.5   18096932   two-component response regulator-like APRR2 
 ppo-u.5   18094205   two-component response regulator-like APRR2 
 mtr-u.5   11430165   two-component response regulator-like APRR2 
 mtr-u.5   25493550   two-component response regulator-like APRR2 
 sly-u.5   101261945   two-component response regulator-like APRR2 
 sly-u.5   101245957   two-component response regulator-like APRR2 

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Top 50 coexpressed genes to APRR2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to APRR2 (ath-u.5 coexpression data)

CoexMap"827527"


athAPRR2 | Entrez gene ID : 827527      
Species ath gma vvi ppo mtr sly bdi hvu bra cit bna sbi ghi osa sot nta cre tae zma
Paralog 9 3 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007623 [list] [network] circadian rhythm  (124 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0000156 [list] [network] phosphorelay response regulator activity  (33 genes)  ISS  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001078405.1 [sequence] [blastp]
NP_001154250.1 [sequence] [blastp]
NP_001190759.1 [sequence] [blastp]
NP_001329339.1 [sequence] [blastp]
NP_001329340.1 [sequence] [blastp]
NP_001329341.1 [sequence] [blastp]
NP_001329342.1 [sequence] [blastp]
NP_001329343.1 [sequence] [blastp]
NP_567548.1 [sequence] [blastp]
NP_849403.1 [sequence] [blastp]
NP_849404.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_001078405.1)
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_001154250.1)
nucl 6,  cyto 2,  plas 1,  vacu 1,  pero 1  (predict for NP_001190759.1)
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_001329339.1)
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_001329340.1)
nucl 6,  cyto 2,  plas 1,  vacu 1,  pero 1  (predict for NP_001329341.1)
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_001329342.1)
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_001329343.1)
nucl 6,  cyto 2,  plas 1,  vacu 1,  pero 1  (predict for NP_567548.1)
nucl 6,  cyto 2,  plas 1,  vacu 1,  pero 1  (predict for NP_849403.1)
nucl 6,  cyto 2,  plas 1,  vacu 1,  pero 1  (predict for NP_849404.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001078405.1)
other 7  (predict for NP_001154250.1)
other 7  (predict for NP_001190759.1)
other 7  (predict for NP_001329339.1)
other 7  (predict for NP_001329340.1)
other 7  (predict for NP_001329341.1)
other 7  (predict for NP_001329342.1)
other 7  (predict for NP_001329343.1)
other 7  (predict for NP_567548.1)
other 7  (predict for NP_849403.1)
other 7  (predict for NP_849404.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
APRR2
ath-r.7
for
APRR2
ath-m.9
for
APRR2
ath-e.2
for
APRR2
ath-m.4.bio
for
APRR2
ath-m.4.hor
for
APRR2
ath-m.4.lig
for
APRR2
ath-m.4.str
for
APRR2
ath-m.4.tis
for
APRR2
gma-u.5
for
100779121
gma-u.5
for
100820385
gma-u.5
for
100784905
vvi-u.5
for
100250547
ppo-u.5
for
18096932
ppo-u.5
for
18094205
mtr-u.5
for
11430165
mtr-u.5
for
25493550
sly-u.5
for
101261945
sly-u.5
for
101245957


Ortholog ID: 7280
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta
Symbol APRR2 LOC103860963 LOC106440201 LOC106360875 LOC107933738 LOC107933590 LOC102630973 LOC100784905 LOC100777535 LOC100250547 LOC18096932 LOC18094205 LOC11430165 LOC25493550 LOC101245957 LOC101261945 LOC102603798 LOC102599201 LOC107762223 LOC107828807
Function* CheY-like two-component responsive regulator family protein two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2 two-component response regulator-like APRR2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 6
ppo00410 beta-Alanine metabolism 2
ppo04075 Plant hormone signal transduction 2
ppo04712 Circadian rhythm - plant 2
ppo00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 6
mtr00195 Photosynthesis 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 2
mtr00620 Pyruvate metabolism 2
mtr01200 Carbon metabolism 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 5
sly00062 Fatty acid elongation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00380 Tryptophan metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827527 103860963 106440201 106360875 107933738 107933590 102630973 100784905 100777535 100250547 18096932 18094205 11430165 25493550 101245957 101261945 102603798 102599201 107762223 107828807
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