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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AAT1   amino acid transporter 1 
 ath-r.7   AAT1   amino acid transporter 1 
 ath-m.9   AAT1   amino acid transporter 1 
 ath-e.2   AAT1   amino acid transporter 1 
 ath-m.4.bio   AAT1   amino acid transporter 1 
 ath-m.4.hor   AAT1   amino acid transporter 1 
 ath-m.4.lig   AAT1   amino acid transporter 1 
 ath-m.4.str   AAT1   amino acid transporter 1 
 ath-m.4.tis   AAT1   amino acid transporter 1 
 bna-r.1   111204738   cationic amino acid transporter 1 
 bna-r.1   106421180   cationic amino acid transporter 1-like 
 bna-r.1   106360999   cationic amino acid transporter 1 
 ghi-r.1   107938512   cationic amino acid transporter 1 
 cit-r.1   102626651   cationic amino acid transporter 1 
 cit-r.1   102626944   cationic amino acid transporter 1 
 gma-u.5   100785183   cationic amino acid transporter 1 
 vvi-u.5   100263534   cationic amino acid transporter 1 
 ppo-u.5   7482130   cationic amino acid transporter 1 
 mtr-u.5   11437143   cationic amino acid transporter 1 
 mtr-u.5   11439928   cationic amino acid transporter 1 
 sly-u.5   101253448   cationic amino acid transporter 1 
 sot-r.1   102590537   cationic amino acid transporter 1-like 
 nta-r.1   107785816   cationic amino acid transporter 1 
 nta-r.1   107762775   cationic amino acid transporter 1-like 
 nta-r.1   107782331   cationic amino acid transporter 1-like 
 osa-u.5   4333545   cationic amino acid transporter 1 
 zma-u.5   100194142   uncharacterized LOC100194142 
 tae-r.2   123122729   cationic amino acid transporter 1 
 hvu-r.1   123452118   cationic amino acid transporter 1 
 sbi-r.1   8062215   cationic amino acid transporter 1 
 bdi-r.1   100828239   cationic amino acid transporter 1 
 cre-r.1   CHLRE_07g329050v5   uncharacterized protein 
 cre-r.1   CHLRE_01g041050v5   uncharacterized protein 

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Top 50 coexpressed genes to AAT1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AAT1 (ath-u.5 coexpression data)

CoexMap"827860"


athAAT1 | Entrez gene ID : 827860      
Species ath bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bra
Paralog 9 3 1 2 1 1 1 2 1 1 3 1 1 1 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0097638 [list] [network] L-arginine import across plasma membrane  (2 genes)  IGI  
GO:0015802 [list] [network] basic amino acid transport  (3 genes)  IGI  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA ISM  
GO:0016020 [list] [network] membrane  (3740 genes)  ISS  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0015189 [list] [network] L-lysine transmembrane transporter activity  (5 genes)  IGI  
GO:0005313 [list] [network] L-glutamate transmembrane transporter activity  (7 genes)  IGI  
GO:0015174 [list] [network] basic amino acid transmembrane transporter activity  (17 genes)  IGI ISS  
Protein NP_001328597.1 [sequence] [blastp]
NP_193844.2 [sequence] [blastp]
Subcellular
localization
wolf
vacu 5,  plas 3,  E.R._vacu 3  (predict for NP_001328597.1)
plas 7,  vacu 1,  golg 1  (predict for NP_193844.2)
Subcellular
localization
TargetP
scret 8  (predict for NP_001328597.1)
other 8  (predict for NP_193844.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AAT1
ath-r.7
for
AAT1
ath-m.9
for
AAT1
ath-e.2
for
AAT1
ath-m.4.bio
for
AAT1
ath-m.4.hor
for
AAT1
ath-m.4.lig
for
AAT1
ath-m.4.str
for
AAT1
ath-m.4.tis
for
AAT1
bna-r.1
for
111204738
bna-r.1
for
106421180
bna-r.1
for
106360999
ghi-r.1
for
107938512
cit-r.1
for
102626651
cit-r.1
for
102626944
gma-u.5
for
100785183
vvi-u.5
for
100263534
ppo-u.5
for
7482130
mtr-u.5
for
11437143
mtr-u.5
for
11439928
sly-u.5
for
101253448
sot-r.1
for
102590537
nta-r.1
for
107785816
nta-r.1
for
107762775
nta-r.1
for
107782331
osa-u.5
for
4333545
zma-u.5
for
100194142
tae-r.2
for
123122729
hvu-r.1
for
123452118
sbi-r.1
for
8062215
bdi-r.1
for
100828239
cre-r.1
for
CHLRE_07g329050v5
cre-r.1
for
CHLRE_01g041050v5


Ortholog ID: 2354
Species ath bna bna bna cit cit gma gma vvi ppo ppo mtr mtr mtr sly sot nta nta osa zma tae hvu sbi bdi cre cre
Symbol AAT1 LOC111204738 LOC106421180 LOC106360999 LOC102626651 LOC102626944 LOC100785183 LOC100794163 LOC100263534 LOC7482130 LOC7473898 LOC11437143 LOC11439928 LOC25501812 LOC101253448 LOC102590537 LOC107784711 LOC107784712 LOC4333545 LOC100194142 LOC123122729 LOC123452118 LOC8062215 LOC100828239 CHLRE_07g329050v5 CHLRE_01g041050v5
Function* amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1-like cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1-like cationic amino acid transporter 1-like cationic amino acid transporter 1-like cationic amino acid transporter 1 uncharacterized LOC100194142 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 cationic amino acid transporter 1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00073 Cutin, suberine and wax biosynthesis 2
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 4
gma00904 Diterpenoid biosynthesis 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
gma00941 Flavonoid biosynthesis 3
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00730 Thiamine metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 3
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00330 Arginine and proline metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827860 111204738 106421180 106360999 102626651 102626944 100785183 100794163 100263534 7482130 7473898 11437143 11439928 25501812 101253448 102590537 107784711 107784712 4333545 100194142 123122729 123452118 8062215 100828239 5716206 5715567
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