ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT4G01110	late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
ath-r.7	AT4G01110	late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
ath-m.9	AT4G01110	late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
ath-e.2	AT4G01110	late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
ath-m.4.bio	AT4G01110	late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
ath-m.4.hor	AT4G01110	late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
ath-m.4.lig	AT4G01110	late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
ath-m.4.str	AT4G01110	late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
ath-m.4.tis	AT4G01110	late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
gma-u.5	100785274	NDR1/HIN1-like protein 13
gma-u.5	102670360	NDR1/HIN1-like protein 13
vvi-u.5	100260268	NDR1/HIN1-like protein 6
ppo-u.5	7494133	NDR1/HIN1-like protein 6
sly-u.5	101260577	NDR1/HIN1-like protein 6

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

ISM

GO MF

Protein

NP_192020.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, cyto 2, nucl 1, mito 1

(predict for NP_192020.2)

Subcellular
localization
TargetP

other 4, mito 3

(predict for NP_192020.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT4G01110	ath-r.7 for AT4G01110	ath-m.9 for AT4G01110	ath-e.2 for AT4G01110	ath-m.4.bio for AT4G01110	ath-m.4.hor for AT4G01110	ath-m.4.lig for AT4G01110	ath-m.4.str for AT4G01110	ath-m.4.tis for AT4G01110	gma-u.5 for 100785274	gma-u.5 for 102670360	vvi-u.5 for 100260268	ppo-u.5 for 7494133	sly-u.5 for 101260577

Ortholog

Ortholog ID: 5282

Species

cit

gma

vvi

ppo

sly

sot

nta

Symbol

Function^*

NDR1/HIN1-like protein 13

NDR1/HIN1-like protein 6

uncharacterized LOC102594489

NDR1/HIN1-like protein 2

uncharacterized LOC107795434

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma03083	Polycomb repressive complex	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	2
nta00920	Sulfur metabolism	2
nta01320	Sulfur cycle	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

Expression

Expression pattern

Entrez Gene ID^*

127900942

102608686

102670360

100785274

100260268

7494133

101260577

102594489

107813841

107795434


Species	ath	gma	vvi	ppo	sly	bdi	mtr	bra	hvu	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	9	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT4G01110 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G01110 (ath-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G01110 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G01110 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**