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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ATMYC1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-r.7   ATMYC1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.9   ATMYC1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-e.2   ATMYC1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.bio   ATMYC1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.hor   ATMYC1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.lig   ATMYC1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.str   ATMYC1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.tis   ATMYC1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 

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Top 50 coexpressed genes to ATMYC1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ATMYC1 (ath-u.5 coexpression data)

CoexMap"827965"


athATMYC1 | Entrez gene ID : 827965      
Species ath tae mtr osa zma bdi vvi sbi ppo bna sly nta cre sot hvu ghi gma cit bra
Paralog 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048629 [list] [network] trichome patterning  (7 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  ISS  
GO CC
GO:0035618 [list] [network] root hair  (24 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001154194.1 [sequence] [blastp]
NP_001329692.1 [sequence] [blastp]
NP_191957.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001154194.1)
nucl 9  (predict for NP_001329692.1)
nucl 9  (predict for NP_191957.2)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001154194.1)
mito 5,  other 4  (predict for NP_001329692.1)
mito 5,  other 4  (predict for NP_191957.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ATMYC1

.
ath-r.7
for
ATMYC1

.
ath-m.9
for
ATMYC1

.
ath-e.2
for
ATMYC1

.
ath-m.4.bio
for
ATMYC1

.
ath-m.4.hor
for
ATMYC1

.
ath-m.4.lig
for
ATMYC1

.
ath-m.4.str
for
ATMYC1

.
ath-m.4.tis
for
ATMYC1

.


Ortholog ID: 22810
Species ath bra bna bna
Symbol ATMYC1 LOC103836915 LOC125593194 LOC106434935
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor MYC1 transcription factor MYC1-like transcription factor MYC1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827965 103836915 125593194 106434935
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