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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   Tic20-IV   translocon at the inner envelope membrane of chloroplasts 20-IV 
 ath-r.7   Tic20-IV   translocon at the inner envelope membrane of chloroplasts 20-IV 
 ath-m.9   Tic20-IV   translocon at the inner envelope membrane of chloroplasts 20-IV 
 ath-e.2   Tic20-IV   translocon at the inner envelope membrane of chloroplasts 20-IV 
 ath-m.4.bio   Tic20-IV   translocon at the inner envelope membrane of chloroplasts 20-IV 
 ath-m.4.hor   Tic20-IV   translocon at the inner envelope membrane of chloroplasts 20-IV 
 ath-m.4.lig   Tic20-IV   translocon at the inner envelope membrane of chloroplasts 20-IV 
 ath-m.4.str   Tic20-IV   translocon at the inner envelope membrane of chloroplasts 20-IV 
 ath-m.4.tis   Tic20-IV   translocon at the inner envelope membrane of chloroplasts 20-IV 
 gma-u.5   100790611   protein TIC 20-IV, chloroplastic 
 gma-u.5   100791350   uncharacterized LOC100791350 
 gma-u.5   100818669   protein TIC 20, chloroplastic 
 vvi-u.5   100264361   protein TIC 20-I, chloroplastic 
 ppo-u.5   112325220   protein TIC 20-IV, chloroplastic 
 ppo-u.5   7479723   protein TIC 20-I, chloroplastic 
 ppo-u.5   7477632   protein TIC 20-I, chloroplastic 
 mtr-u.5   25487600   protein TIC 20-IV, chloroplastic 
 mtr-u.5   25487601   protein TIC 20-IV, chloroplastic 
 mtr-u.5   25491386   protein TIC 20, chloroplastic 
 sly-u.5   101263407   protein TIC 20-I, chloroplastic 
 sly-u.5   101258263   protein TIC 20-I, chloroplastic 
 osa-u.5   4343643   protein TIC 20-I, chloroplastic 
 osa-u.5   4329976   protein TIC 20-I, chloroplastic 
 zma-u.5   100273053   uncharacterized LOC100273053 
 zma-u.5   100272545   Tic20-like protein 
 zma-u.5   100282929   tic20-like protein 

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Top 50 coexpressed genes to Tic20-IV (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to Tic20-IV (ath-u.5 coexpression data)

CoexMap"827972"


athTic20-IV | Entrez gene ID : 827972      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 3 1 3 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045037 [list] [network] protein import into chloroplast stroma  (29 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO MF
Protein NP_192241.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1  (predict for NP_192241.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for NP_192241.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
Tic20-IV

.
ath-r.7
for
Tic20-IV

.
ath-m.9
for
Tic20-IV

.
ath-e.2
for
Tic20-IV

.
ath-m.4.bio
for
Tic20-IV

.
ath-m.4.hor
for
Tic20-IV

.
ath-m.4.lig
for
Tic20-IV

.
ath-m.4.str
for
Tic20-IV

.
ath-m.4.tis
for
Tic20-IV

.
gma-u.5
for
100790611

.
gma-u.5
for
100791350

.
gma-u.5
for
100818669

.
vvi-u.5
for
100264361

.
ppo-u.5
for
112325220

.
ppo-u.5
for
7479723

.
ppo-u.5
for
7477632

.
mtr-u.5
for
25487600

.
mtr-u.5
for
25487601

.
mtr-u.5
for
25491386

.
sly-u.5
for
101263407

.
sly-u.5
for
101258263

.
osa-u.5
for
4343643

.
osa-u.5
for
4329976

.
zma-u.5
for
100273053

.
zma-u.5
for
100272545

.
zma-u.5
for
100282929

.


Ortholog ID: 2746
Species ath gma gma sly sly osa osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol Tic20-IV LOC100791350 LOC100790611 LOC101258263 LOC101263407 LOC4343643 LOC4329976 LOC100282929 LOC100273053 LOC103846701 LOC100264361 LOC112325220 LOC7477632 LOC25491386 LOC25487600 LOC123052365 LOC123144825 LOC123406403 LOC123425650 LOC107898937 LOC107935051 LOC106402311 LOC111211887 CHLRE_08g379650v5 LOC8072461 LOC8081768 LOC102577670 LOC102601586 LOC102614016 LOC102625332 LOC104584251 LOC100826365 LOC142161758 LOC142166397
Function* translocon at the inner envelope membrane of chloroplasts 20-IV uncharacterized LOC100791350 protein TIC 20-IV, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic tic20-like protein uncharacterized LOC100273053 protein TIC 20-IV, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-IV, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20, chloroplastic protein TIC 20-IV, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic-like protein TIC 20-I, chloroplastic-like protein TIC 20-IV, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-IV, chloroplastic protein TIC 20-IV, chloroplastic-like uncharacterized protein protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic-like protein TIC 20-IV, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic protein TIC 20-I, chloroplastic-like protein TIC 20-I, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00513 Various types of N-glycan biosynthesis 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
gma00330 Arginine and proline metabolism 2
gma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly00970 Aminoacyl-tRNA biosynthesis 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 4
osa01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 7
bra03040 Spliceosome 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo03040 Spliceosome 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03060 Protein export 3
tae03015 mRNA surveillance pathway 3
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00290 Valine, leucine and isoleucine biosynthesis 2
hvu00660 C5-Branched dibasic acid metabolism 2
hvu01210 2-Oxocarboxylic acid metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna04141 Protein processing in endoplasmic reticulum 3
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna03083 Polycomb repressive complex 3
bna04120 Ubiquitin mediated proteolysis 3
bna03018 RNA degradation 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 6
cit03040 Spliceosome 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 2
nta00620 Pyruvate metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
nta01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827972 100791350 100790611 101258263 101263407 4343643 4329976 100282929 100273053 103846701 100264361 112325220 7477632 25491386 25487600 123052365 123144825 123406403 123425650 107898937 107935051 106402311 111211887 5719882 8072461 8081768 102577670 102601586 102614016 102625332 104584251 100826365 142161758 142166397
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