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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ABP1   endoplasmic reticulum auxin binding protein 1 
 ath-r.7   ABP1   endoplasmic reticulum auxin binding protein 1 
 ath-m.9   ABP1   endoplasmic reticulum auxin binding protein 1 
 ath-e.2   ABP1   endoplasmic reticulum auxin binding protein 1 
 ath-m.4.bio   ABP1   endoplasmic reticulum auxin binding protein 1 
 ath-m.4.hor   ABP1   endoplasmic reticulum auxin binding protein 1 
 ath-m.4.lig   ABP1   endoplasmic reticulum auxin binding protein 1 
 ath-m.4.str   ABP1   endoplasmic reticulum auxin binding protein 1 
 ath-m.4.tis   ABP1   endoplasmic reticulum auxin binding protein 1 
 bra-r.6   103858725   auxin-binding protein 1 
 bra-r.6   103836703   auxin-binding protein 1 
 bna-r.1   106421236   auxin-binding protein 1 
 bna-r.1   106389987   auxin-binding protein 1 
 bna-r.1   106392275   auxin-binding protein 1 
 ghi-r.1   107930335   auxin-binding protein T85 
 cit-r.1   102608050   auxin-binding protein T85 
 gma-u.5   100801817   auxin-binding protein T85 
 vvi-u.5   ABP1   auxin-binding protein 1 
 ppo-u.5   18096524   auxin-binding protein T85 
 mtr-u.5   11420038   auxin-binding protein T85 
 sly-u.5   ERabp1   ER auxin binding protein 1 
 sot-r.1   102602619   auxin-binding protein T85 
 nta-r.1   107831537   auxin-binding protein T85 
 osa-u.5   4352396   auxin-binding protein 4 
 zma-u.5   542232   auxin binding protein 1 
 zma-u.5   118471935   auxin-binding protein 4-like 
 zma-u.5   118473544   auxin-binding protein 4 
 tae-r.2   123119858   auxin-binding protein 4 
 tae-r.2   123102663   auxin-binding protein 4 
 hvu-r.1   123395705   auxin-binding protein 1 
 sbi-r.1   8064623   auxin-binding protein 4 
 bdi-r.1   100830045   auxin-binding protein 4 

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Top 50 coexpressed genes to ABP1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ABP1 (ath-u.5 coexpression data)

CoexMap"828120"


athABP1 | Entrez gene ID : 828120      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 1 1 1 1 1 1 1 1 1 1 3 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0045793 [list] [network] positive regulation of cell size  (4 genes)  IMP  
GO:0032877 [list] [network] positive regulation of DNA endoreduplication  (6 genes)  IMP  
GO:0051781 [list] [network] positive regulation of cell division  (15 genes)  IMP  
GO:0010928 [list] [network] regulation of auxin mediated signaling pathway  (48 genes)  IMP  
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  IMP  
GO:0000911 [list] [network] cytokinesis by cell plate formation  (70 genes)  IMP  
GO:0009826 [list] [network] unidimensional cell growth  (310 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO:0007165 [list] [network] signal transduction  (1102 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0010011 [list] [network] auxin binding  (10 genes)  IMP ISS  
GO:0008270 [list] [network] zinc ion binding  (391 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_192207.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 2,  chlo_mito 2,  vacu 1,  cyto_E.R. 1  (predict for NP_192207.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_192207.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ABP1
ath-r.7
for
ABP1
ath-m.9
for
ABP1
ath-e.2
for
ABP1
ath-m.4.bio
for
ABP1
ath-m.4.hor
for
ABP1
ath-m.4.lig
for
ABP1
ath-m.4.str
for
ABP1
ath-m.4.tis
for
ABP1
bra-r.6
for
103858725
bra-r.6
for
103836703
bna-r.1
for
106421236
bna-r.1
for
106389987
bna-r.1
for
106392275
ghi-r.1
for
107930335
cit-r.1
for
102608050
gma-u.5
for
100801817
vvi-u.5
for
ABP1
ppo-u.5
for
18096524
mtr-u.5
for
11420038
sly-u.5
for
ERabp1
sot-r.1
for
102602619
nta-r.1
for
107831537
osa-u.5
for
4352396
zma-u.5
for
542232
zma-u.5
for
118471935
zma-u.5
for
118473544
tae-r.2
for
123119858
tae-r.2
for
123102663
hvu-r.1
for
123395705
sbi-r.1
for
8064623
bdi-r.1
for
100830045


Ortholog ID: 8550
Species ath bra bra bna bna bna ghi cit gma vvi ppo mtr sly sot nta osa zma zma zma tae tae hvu sbi bdi
Symbol ABP1 LOC103858725 LOC103836703 LOC106389987 LOC106392275 LOC106438717 LOC107930335 LOC102608050 LOC100801817 ABP1 LOC18096524 LOC11420038 ERabp1 LOC102602619 LOC107831537 LOC4352396 LOC542232 LOC118473544 LOC542294 LOC123119858 LOC123102663 LOC123395705 LOC8064623 LOC100830045
Function* endoplasmic reticulum auxin binding protein 1 auxin-binding protein 1 auxin-binding protein 1 auxin-binding protein 1 auxin-binding protein 1 auxin-binding protein 1 auxin-binding protein T85 auxin-binding protein T85 auxin-binding protein T85 auxin-binding protein 1 auxin-binding protein T85 auxin-binding protein T85 ER auxin binding protein 1 auxin-binding protein T85 auxin-binding protein T85 auxin-binding protein 4 auxin binding protein 1 auxin-binding protein 4 auxin binding protein homolog 4 auxin-binding protein 4 auxin-binding protein 4 auxin-binding protein 1 auxin-binding protein 4 auxin-binding protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00920 Sulfur metabolism 4
bra01230 Biosynthesis of amino acids 4
bra00270 Cysteine and methionine metabolism 3
bra01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
bra03015 mRNA surveillance pathway 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04075 Plant hormone signal transduction 2
bna04120 Ubiquitin mediated proteolysis 2
bna00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna03008 Ribosome biogenesis in eukaryotes 2
bna04075 Plant hormone signal transduction 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 6
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 3
gma04075 Plant hormone signal transduction 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04145 Phagosome 3
ppo00900 Terpenoid backbone biosynthesis 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 8
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma01230 Biosynthesis of amino acids 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma01240 Biosynthesis of cofactors 3
zma00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma01240 Biosynthesis of cofactors 3
zma00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
bdi00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828120 103858725 103836703 106389987 106392275 106438717 107930335 102608050 100801817 100233074 18096524 11420038 543734 102602619 107831537 4352396 542232 118473544 542294 123119858 123102663 123395705 8064623 100830045
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