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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-r.7   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.9   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-e.2   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.bio   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.hor   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.lig   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.str   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.tis   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 gma-u.5   100811639   DNA replication licensing factor MCM7 
 gma-u.5   100802903   DNA replication licensing factor MCM7 
 vvi-u.5   100267599   DNA replication licensing factor MCM7 
 ppo-u.5   7491255   DNA replication licensing factor MCM7 
 mtr-u.5   11430699   DNA replication licensing factor MCM7 
 sly-u.5   101243636   DNA replication licensing factor MCM7-like protein 
 osa-u.5   4352514   DNA replication licensing factor MCM7-like 
 zma-u.5   542504   replication licensing factor MCM7 homologue 
 zma-u.5   100273978   uncharacterized LOC100273978 

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Top 50 coexpressed genes to PRL (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PRL (ath-u.5 coexpression data)

CoexMap"828153"


athPRL | Entrez gene ID : 828153      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03030 [list] [network] DNA replication (43 genes)
GO BP
GO:0090329 [list] [network] regulation of DNA-templated DNA replication  (38 genes)  IPI  
GO:0010182 [list] [network] sugar mediated signaling pathway  (40 genes)  TAS  
GO:0009555 [list] [network] pollen development  (385 genes)  IMP  
GO:0009790 [list] [network] embryo development  (598 genes)  IMP  
GO CC
GO:0000347 [list] [network] THO complex  (14 genes)  IDA  
GO:0000785 [list] [network] chromatin  (140 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001190655.1 [sequence] [blastp]
NP_192115.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 1,  nucl 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001190655.1)
cyto 5,  chlo 1,  nucl 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1  (predict for NP_192115.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190655.1)
other 8  (predict for NP_192115.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PRL

.
ath-r.7
for
PRL

.
ath-m.9
for
PRL

.
ath-e.2
for
PRL

.
ath-m.4.bio
for
PRL

.
ath-m.4.hor
for
PRL

.
ath-m.4.lig
for
PRL

.
ath-m.4.str
for
PRL

.
ath-m.4.tis
for
PRL

.
gma-u.5
for
100811639

.
gma-u.5
for
100802903

.
vvi-u.5
for
100267599

.
ppo-u.5
for
7491255

.
mtr-u.5
for
11430699

.
sly-u.5
for
101243636

.
osa-u.5
for
4352514

.
zma-u.5
for
542504

.
zma-u.5
for
100273978

.


Ortholog ID: 8093
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PRL LOC100802903 LOC100811639 LOC101243636 LOC4352514 LOC542504 LOC100273978 LOC103858780 LOC103836781 LOC100267599 LOC7491255 LOC11430699 LOC123110760 LOC123102571 LOC123452333 LOC107912324 LOC107924650 LOC106438659 LOC106435589 CHLRE_10g455850v5 LOC8066367 LOC102601493 LOC102629070 LOC100834667 LOC107795499 LOC107774668
Function* Minichromosome maintenance (MCM2/3/5) family protein DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7-like protein DNA replication licensing factor MCM7-like replication licensing factor MCM7 homologue uncharacterized LOC100273978 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 uncharacterized protein DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 12
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
ath00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
gma03430 Mismatch repair 3
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 10
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 13
osa03420 Nucleotide excision repair 4
osa03430 Mismatch repair 3
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 12
zma03420 Nucleotide excision repair 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 10
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 9
bra03430 Mismatch repair 3
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 8
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 11
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 17
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 5
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01232 Nucleotide metabolism 6
ghi03030 DNA replication 4
ghi00230 Purine metabolism 4
ghi00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00480 Glutathione metabolism 4
ghi01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03440 Homologous recombination 5
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 10
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 13
sbi03420 Nucleotide excision repair 3
sbi03440 Homologous recombination 3
sbi03430 Mismatch repair 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 10
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 8
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 10
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 3
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 13
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 12
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828153 100802903 100811639 101243636 4352514 542504 100273978 103858780 103836781 100267599 7491255 11430699 123110760 123102571 123452333 107912324 107924650 106438659 106435589 5723922 8066367 102601493 102629070 100834667 107795499 107774668
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