Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G25320   AT hook motif DNA-binding family protein 
 ath-r.7   AT4G25320   AT hook motif DNA-binding family protein 
 ath-m.9   AT4G25320   AT hook motif DNA-binding family protein 
 ath-e.2   AT4G25320   AT hook motif DNA-binding family protein 
 ath-m.4.bio   AT4G25320   AT hook motif DNA-binding family protein 
 ath-m.4.hor   AT4G25320   AT hook motif DNA-binding family protein 
 ath-m.4.lig   AT4G25320   AT hook motif DNA-binding family protein 
 ath-m.4.str   AT4G25320   AT hook motif DNA-binding family protein 
 ath-m.4.tis   AT4G25320   AT hook motif DNA-binding family protein 
 bra-r.6   103861546   AT-hook motif nuclear-localized protein 3 
 bra-r.6   103863132   AT-hook motif nuclear-localized protein 3 
 bna-r.1   106358497   AT-hook motif nuclear-localized protein 4-like 
 bna-r.1   106361721   AT-hook motif nuclear-localized protein 3-like 
 bna-r.1   106380992   AT-hook motif nuclear-localized protein 4 

close


Top 50 coexpressed genes to AT4G25320 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT4G25320 (ath-u.5 coexpression data)

CoexMap"828635"


athAT4G25320 | Entrez gene ID : 828635      
Species ath bra bna sbi ghi cre mtr tae cit sot bdi vvi ppo sly zma osa gma nta hvu
Paralog 9 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010089 [list] [network] xylem development  (46 genes)  IMP  
GO:0010051 [list] [network] xylem and phloem pattern formation  (69 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003680 [list] [network] minor groove of adenine-thymine-rich DNA binding  (15 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_194262.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  vacu 1,  plas 1,  E.R._vacu 1,  cyto_pero 1  (predict for NP_194262.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_194262.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G25320
ath-r.7
for
AT4G25320
ath-m.9
for
AT4G25320
ath-e.2
for
AT4G25320
ath-m.4.bio
for
AT4G25320
ath-m.4.hor
for
AT4G25320
ath-m.4.lig
for
AT4G25320
ath-m.4.str
for
AT4G25320
ath-m.4.tis
for
AT4G25320
bra-r.6
for
103861546
bra-r.6
for
103863132
bna-r.1
for
106358497
bna-r.1
for
106361721
bna-r.1
for
106380992


Ortholog ID: 15844
Species ath bra bra bna bna bna
Symbol AT4G25320 LOC103861546 LOC103863132 LOC106361721 LOC106439698 LOC106443088
Function* AT hook motif DNA-binding family protein AT-hook motif nuclear-localized protein 3 AT-hook motif nuclear-localized protein 3 AT-hook motif nuclear-localized protein 3-like AT-hook motif nuclear-localized protein 3 AT-hook motif nuclear-localized protein 3
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828635 103861546 103863132 106361721 106439698 106443088
The preparation time of this page was 0.2 [sec].