Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G25410   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-r.7   AT4G25410   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.9   AT4G25410   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-e.2   AT4G25410   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.bio   AT4G25410   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.hor   AT4G25410   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.lig   AT4G25410   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.str   AT4G25410   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.tis   AT4G25410   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT4G25400   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT5G51780   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT5G51790   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100780888   transcription factor bHLH118 
 gma-u.5   100795953   transcription factor bHLH118 
 mtr-u.5   25479498   transcription factor bHLH36 
 mtr-u.5   11415125   transcription factor bHLH118 
 mtr-u.5   25479499   transcription factor bHLH118 
 sly-u.5   101245065   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 sly-u.5   101267867   transcription factor bHLH36-like 

close


Top 50 coexpressed genes to AT4G25410 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT4G25410 (ath-u.5 coexpression data)

CoexMap"828644"


athAT4G25410 | Entrez gene ID : 828644      
Species ath gma mtr sly bdi hvu bra vvi cit bna ppo sbi ghi osa sot nta cre tae zma
Paralog 12 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  ISS TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001320062.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  plas 1  (predict for NP_001320062.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001320062.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G25410
ath-r.7
for
AT4G25410
ath-m.9
for
AT4G25410
ath-e.2
for
AT4G25410
ath-m.4.bio
for
AT4G25410
ath-m.4.hor
for
AT4G25410
ath-m.4.lig
for
AT4G25410
ath-m.4.str
for
AT4G25410
ath-m.4.tis
for
AT4G25410
ath-u.5
for
AT4G25400
ath-u.5
for
AT5G51780
ath-u.5
for
AT5G51790
gma-u.5
for
100780888
gma-u.5
for
100795953
mtr-u.5
for
25479498
mtr-u.5
for
11415125
mtr-u.5
for
25479499
sly-u.5
for
101245065
sly-u.5
for
101267867


Ortholog ID: 2233
Species ath ath bra bra ghi cit gma mtr mtr sly sly sot sot
Symbol AT5G51780 AT5G51790 LOC103832862 LOC103861555 LOC107945011 LOC102631004 LOC100795953 LOC25479498 LOC25479499 LOC101245065 LOC101267867 LOC102584358 LOC102582117
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH36-like transcription factor bHLH118 transcription factor bHLH118 transcription factor bHLH36 transcription factor bHLH118 transcription factor bHLH36 transcription factor bHLH118 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH36-like transcription factor bHLH36-like transcription factor bHLH118-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
sly00941 Flavonoid biosynthesis 2
sly00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 4
sot04075 Plant hormone signal transduction 4
sot02010 ABC transporters 2
sot04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835252 835253 103832862 103861555 107945011 102631004 100795953 25479498 25479499 101245065 101267867 102584358 102582117
The preparation time of this page was 0.2 [sec].