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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G29440   Regulator of Vps4 activity in the MVB pathway protein 
 ath-r.7   AT4G29440   Regulator of Vps4 activity in the MVB pathway protein 
 ath-m.9   AT4G29440   Regulator of Vps4 activity in the MVB pathway protein 
 ath-e.2   AT4G29440   Regulator of Vps4 activity in the MVB pathway protein 
 ath-m.4.bio   AT4G29440   Regulator of Vps4 activity in the MVB pathway protein 
 ath-m.4.hor   AT4G29440   Regulator of Vps4 activity in the MVB pathway protein 
 ath-m.4.lig   AT4G29440   Regulator of Vps4 activity in the MVB pathway protein 
 ath-m.4.str   AT4G29440   Regulator of Vps4 activity in the MVB pathway protein 
 ath-m.4.tis   AT4G29440   Regulator of Vps4 activity in the MVB pathway protein 
 bra-r.6   103853576   nucleolar and coiled-body phosphoprotein 1 
 bna-r.1   106386514   nucleolar and coiled-body phosphoprotein 1 
 bna-r.1   106397458   WASH complex subunit 2 

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Top 50 coexpressed genes to AT4G29440 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G29440 (ath-u.5 coexpression data)

CoexMap"829065"


athAT4G29440 | Entrez gene ID : 829065      
Species ath bra bna zma ghi nta vvi osa sot hvu gma tae sly bdi ppo cit sbi mtr cre
Paralog 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001031748.1 [sequence] [blastp]
NP_194673.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001031748.1)
nucl 4,  mito 4,  cyto_nucl 3,  chlo 1  (predict for NP_194673.2)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_001031748.1)
mito 4  (predict for NP_194673.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G29440
ath-r.7
for
AT4G29440
ath-m.9
for
AT4G29440
ath-e.2
for
AT4G29440
ath-m.4.bio
for
AT4G29440
ath-m.4.hor
for
AT4G29440
ath-m.4.lig
for
AT4G29440
ath-m.4.str
for
AT4G29440
ath-m.4.tis
for
AT4G29440
bra-r.6
for
103853576
bna-r.1
for
106386514
bna-r.1
for
106397458


Ortholog ID: 20727
Species ath bra bna bna
Symbol AT4G29440 LOC103853576 LOC106386514 LOC106397458
Function* Regulator of Vps4 activity in the MVB pathway protein nucleolar and coiled-body phosphoprotein 1 nucleolar and coiled-body phosphoprotein 1 WASH complex subunit 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829065 103853576 106386514 106397458
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