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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PRHA   pathogenesis related homeodomain protein A 
 ath-r.7   PRHA   pathogenesis related homeodomain protein A 
 ath-m.9   PRHA   pathogenesis related homeodomain protein A 
 ath-e.2   PRHA   pathogenesis related homeodomain protein A 
 ath-m.4.bio   PRHA   pathogenesis related homeodomain protein A 
 ath-m.4.hor   PRHA   pathogenesis related homeodomain protein A 
 ath-m.4.lig   PRHA   pathogenesis related homeodomain protein A 
 ath-m.4.str   PRHA   pathogenesis related homeodomain protein A 
 ath-m.4.tis   PRHA   pathogenesis related homeodomain protein A 
 bra-r.6   103853065   pathogenesis-related homeodomain protein 
 bra-r.6   103834696   pathogenesis-related homeodomain protein 
 bna-r.1   106389726   pathogenesis-related homeodomain protein 
 bna-r.1   106361157   pathogenesis-related homeodomain protein-like 
 bna-r.1   106390069   pathogenesis-related homeodomain protein 
 ghi-r.1   107907366   pathogenesis-related homeodomain protein 
 ghi-r.1   107902880   pathogenesis-related homeodomain protein 
 cit-r.1   102628825   pathogenesis-related homeodomain protein 
 gma-u.5   100817639   pathogenesis-related homeodomain protein 
 gma-u.5   100787118   pathogenesis-related homeodomain protein 
 gma-u.5   100815437   pathogenesis-related homeodomain protein 
 vvi-u.5   100262260   pathogenesis-related homeodomain protein 
 ppo-u.5   7474731   pathogenesis-related homeodomain protein 
 ppo-u.5   7490498   pathogenesis-related homeodomain protein 
 mtr-u.5   11443217   pathogenesis-related homeodomain protein 
 sly-u.5   101259264   pathogenesis-related homeodomain protein 
 sot-r.1   102590718   pathogenesis-related homeodomain protein 
 nta-r.1   107797282   pathogenesis-related homeodomain protein 
 nta-r.1   107825426   pathogenesis-related homeodomain protein 
 osa-u.5   4328295   pathogenesis-related homeodomain protein 
 zma-u.5   111589339   pathogenesis-related homeodomain protein-like 
 tae-r.2   123143794   pathogenesis-related homeodomain protein 
 tae-r.2   123136290   pathogenesis-related homeodomain protein 
 tae-r.2   123132243   pathogenesis-related homeodomain protein 
 hvu-r.1   123401210   pathogenesis-related homeodomain protein 
 sbi-r.1   8069966   pathogenesis-related homeodomain protein 
 bdi-r.1   100822239   pathogenesis-related homeodomain protein 

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Top 50 coexpressed genes to PRHA (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PRHA (ath-u.5 coexpression data)

CoexMap"829117"


athPRHA | Entrez gene ID : 829117      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 3 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IDA  
GO:0009733 [list] [network] response to auxin  (344 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001190867.1 [sequence] [blastp]
NP_194723.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001190867.1)
nucl 10  (predict for NP_194723.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001190867.1)
other 8,  chlo 3  (predict for NP_194723.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PRHA
ath-r.7
for
PRHA
ath-m.9
for
PRHA
ath-e.2
for
PRHA
ath-m.4.bio
for
PRHA
ath-m.4.hor
for
PRHA
ath-m.4.lig
for
PRHA
ath-m.4.str
for
PRHA
ath-m.4.tis
for
PRHA
bra-r.6
for
103853065
bra-r.6
for
103834696
bna-r.1
for
106389726
bna-r.1
for
106361157
bna-r.1
for
106390069
ghi-r.1
for
107907366
ghi-r.1
for
107902880
cit-r.1
for
102628825
gma-u.5
for
100817639
gma-u.5
for
100787118
gma-u.5
for
100815437
vvi-u.5
for
100262260
ppo-u.5
for
7474731
ppo-u.5
for
7490498
mtr-u.5
for
11443217
sly-u.5
for
101259264
sot-r.1
for
102590718
nta-r.1
for
107797282
nta-r.1
for
107825426
osa-u.5
for
4328295
zma-u.5
for
111589339
tae-r.2
for
123143794
tae-r.2
for
123136290
tae-r.2
for
123132243
hvu-r.1
for
123401210
sbi-r.1
for
8069966
bdi-r.1
for
100822239


Ortholog ID: 7683
Species ath bra bra bna bna bna ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol PRHA LOC103853065 LOC103834696 LOC106361157 LOC106390069 LOC106416404 LOC107907366 LOC107902880 LOC102628825 LOC100787118 LOC100815437 LOC100816912 LOC100262260 LOC7474731 LOC7490498 LOC11443217 LOC101259264 LOC102590718 LOC107797282 LOC107825426 LOC4328295 LOC111589339 LOC123143794 LOC123136290 LOC123132243 LOC123401210 LOC8069966 LOC100822239
Function* pathogenesis related homeodomain protein A pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein-like pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein-like pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829117 103853065 103834696 106361157 106390069 106416404 107907366 107902880 102628825 100787118 100815437 100816912 100262260 7474731 7490498 11443217 101259264 102590718 107797282 107825426 4328295 111589339 123143794 123136290 123132243 123401210 8069966 100822239
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