ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT4G30630	uncharacterized protein
ath-r.7	AT4G30630	uncharacterized protein
ath-m.9	AT4G30630	uncharacterized protein
ath-e.2	AT4G30630	uncharacterized protein
ath-m.4.bio	AT4G30630	uncharacterized protein
ath-m.4.hor	AT4G30630	uncharacterized protein
ath-m.4.lig	AT4G30630	uncharacterized protein
ath-m.4.str	AT4G30630	uncharacterized protein
ath-m.4.tis	AT4G30630	uncharacterized protein
ath-u.5	AT5G57910	ribosomal RNA small subunit methyltransferase G
bra-r.6	103852566	uncharacterized LOC103852566
bra-r.6	103851676	uncharacterized LOC103851676
bra-r.6	103845232	uncharacterized LOC103845232
bna-r.1	BNAC02G11110D	uncharacterized BNAC02G11110D
bna-r.1	106385196	uncharacterized LOC106385196
bna-r.1	106371566	uncharacterized LOC106371566
ghi-r.1	107948702	uncharacterized LOC107948702
ghi-r.1	107940069	uncharacterized LOC107940069
ghi-r.1	107919918	uncharacterized LOC107919918
cit-r.1	102612451	uncharacterized LOC102612451
gma-u.5	100782706	uncharacterized LOC100782706
gma-u.5	100786273	uncharacterized LOC100786273
vvi-u.5	100267212	uncharacterized LOC100267212
ppo-u.5	7485251	uncharacterized LOC7485251
ppo-u.5	7489438	uncharacterized LOC7489438
mtr-u.5	11438626	uncharacterized LOC11438626
sly-u.5	101266194	uncharacterized LOC101266194
sly-u.5	101246261	uncharacterized LOC101246261
sot-r.1	102584810	uncharacterized LOC102584810
sot-r.1	102597642	uncharacterized LOC102597642
nta-r.1	107777476	uncharacterized LOC107777476
nta-r.1	107809538	uncharacterized LOC107809538
nta-r.1	107804863	uncharacterized LOC107804863
osa-u.5	4345139	uncharacterized LOC4345139
zma-u.5	100276816	uncharacterized LOC100276816
zma-u.5	100277886	uncharacterized LOC100277886
tae-r.2	123132602	uncharacterized LOC123132602
tae-r.2	123136705	uncharacterized LOC123136705
tae-r.2	123144188	uncharacterized LOC123144188
hvu-r.1	123403464	uncharacterized LOC123403464
sbi-r.1	8079390	uncharacterized LOC8079390
bdi-r.1	100836979	uncharacterized LOC100836979

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0031011 [list] [network] Ino80 complex

(16 genes)

IDA

GO MF

Protein

NP_001328233.1 [sequence] [blastp]
NP_194792.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, chlo 3, cyto_nucl 2, nucl 1, cyto 1	(predict for NP_001328233.1)
chlo 4, extr 3, nucl 2, chlo_mito 2	(predict for NP_194792.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001328233.1)
other 8	(predict for NP_194792.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT4G30630	ath-r.7 for AT4G30630	ath-m.9 for AT4G30630	ath-e.2 for AT4G30630	ath-m.4.bio for AT4G30630	ath-m.4.hor for AT4G30630	ath-m.4.lig for AT4G30630	ath-m.4.str for AT4G30630	ath-m.4.tis for AT4G30630	ath-u.5 for AT5G57910	bra-r.6 for 103852566	bra-r.6 for 103851676	bra-r.6 for 103845232	bna-r.1 for BNAC02G11110D	bna-r.1 for 106385196	bna-r.1 for 106371566	ghi-r.1 for 107948702	ghi-r.1 for 107940069	ghi-r.1 for 107919918	cit-r.1 for 102612451	gma-u.5 for 100782706	gma-u.5 for 100786273	vvi-u.5 for 100267212	ppo-u.5 for 7485251	ppo-u.5 for 7489438	mtr-u.5 for 11438626	sly-u.5 for 101266194	sly-u.5 for 101246261	sot-r.1 for 102584810	sot-r.1 for 102597642	nta-r.1 for 107777476	nta-r.1 for 107809538	nta-r.1 for 107804863	osa-u.5 for 4345139	zma-u.5 for 100276816	zma-u.5 for 100277886	tae-r.2 for 123132602	tae-r.2 for 123136705	tae-r.2 for 123144188	hvu-r.1 for 123403464	sbi-r.1 for 8079390	bdi-r.1 for 100836979

Ortholog

Ortholog ID: 3722

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized protein

ribosomal RNA small subunit methyltransferase G

uncharacterized LOC103852566

uncharacterized LOC103845232

uncharacterized LOC103856723

uncharacterized LOC106385196

uncharacterized LOC106443301

uncharacterized BNAA01G06520D

uncharacterized LOC107919918

uncharacterized LOC107906896

uncharacterized LOC107953789

uncharacterized LOC102612451

uncharacterized LOC100782706

uncharacterized LOC100786273

uncharacterized LOC100267212

uncharacterized LOC7485251

uncharacterized LOC7489438

uncharacterized LOC11438626

uncharacterized LOC101266194

uncharacterized LOC101246261

uncharacterized LOC102584810

uncharacterized LOC102597642

uncharacterized LOC107809538

uncharacterized LOC107804863

uncharacterized LOC107829375

uncharacterized LOC4345139

uncharacterized LOC100276816

uncharacterized LOC100277886

uncharacterized LOC123132602

uncharacterized LOC123136705

uncharacterized LOC123144188

uncharacterized LOC123403464

uncharacterized LOC8079390

uncharacterized LOC100836979

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2
bna04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	4
sly04075	Plant hormone signal transduction	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00770	Pantothenate and CoA biosynthesis	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2
zma04141	Protein processing in endoplasmic reticulum	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	3
zma00260	Glycine, serine and threonine metabolism	2
zma00460	Cyanoamino acid metabolism	2
zma00630	Glyoxylate and dicarboxylate metabolism	2
zma00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	2
tae04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3

Expression

Expression pattern

Entrez Gene ID^*

829186

835902

103852566

103845232

103856723

106385196

106443301

106393371

107919918

107906896

107953789

102612451

100782706

100786273

100267212

7485251

7489438

11438626

101266194

101246261

102584810

102597642

107809538

107804863

107829375

4345139

100276816

100277886

123132602

123136705

123144188

123403464

8079390

100836979

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT4G30630 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G30630 (ath-u.5 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	10	3	3	3	1	2	1	2	1	2	2	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G30630 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G30630 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**