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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PBA1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-r.7   PBA1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-m.9   PBA1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-e.2   PBA1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-m.4.bio   PBA1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-m.4.hor   PBA1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-m.4.lig   PBA1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-m.4.str   PBA1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-m.4.tis   PBA1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 gma-u.5   100793551   proteasome subunit beta type-6 
 gma-u.5   100305513   uncharacterized LOC100305513 
 vvi-u.5   100262044   proteasome subunit beta type-6 
 vvi-u.5   100266463   proteasome subunit beta type-6 
 ppo-u.5   18107848   proteasome subunit beta type-6 
 ppo-u.5   7487221   proteasome subunit beta type-6 
 mtr-u.5   11436076   proteasome subunit beta type-6 
 mtr-u.5   11432004   proteasome subunit beta type-6 
 sly-u.5   101256394   proteasome subunit beta type-6 
 osa-u.5   4330861   proteasome subunit beta type-6 
 osa-u.5   4340065   proteasome subunit beta type-6 
 zma-u.5   100272427   uncharacterized LOC100272427 
 zma-u.5   100191806   uncharacterized LOC100191806 

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Top 50 coexpressed genes to PBA1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PBA1 (ath-u.5 coexpression data)

CoexMap"829257"


athPBA1 | Entrez gene ID : 829257      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 2 2 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03050 [list] [network] Proteasome (61 genes)
GO BP
GO:0010363 [list] [network] regulation of plant-type hypersensitive response  (31 genes)  IMP  
GO:0010043 [list] [network] response to zinc ion  (51 genes)  IEP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  TAS  
GO CC
GO:0019774 [list] [network] proteasome core complex, beta-subunit complex  (11 genes)  ISS  
GO:0005839 [list] [network] proteasome core complex  (23 genes)  TAS  
GO:0000502 [list] [network] proteasome complex  (53 genes)  IDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO MF
GO:0004298 [list] [network] threonine-type endopeptidase activity  (1 genes)  IEA  
GO:0008233 [list] [network] peptidase activity  (264 genes)  IMP  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031759.1 [sequence] [blastp]
NP_001190879.1 [sequence] [blastp]
NP_194858.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1  (predict for NP_001031759.1)
cyto 8,  nucl 1  (predict for NP_001190879.1)
cyto 8,  nucl 1  (predict for NP_194858.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001031759.1)
other 9  (predict for NP_001190879.1)
other 9  (predict for NP_194858.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PBA1
ath-r.7
for
PBA1
ath-m.9
for
PBA1
ath-e.2
for
PBA1
ath-m.4.bio
for
PBA1
ath-m.4.hor
for
PBA1
ath-m.4.lig
for
PBA1
ath-m.4.str
for
PBA1
ath-m.4.tis
for
PBA1
gma-u.5
for
100793551
gma-u.5
for
100305513
vvi-u.5
for
100262044
vvi-u.5
for
100266463
ppo-u.5
for
18107848
ppo-u.5
for
7487221
mtr-u.5
for
11436076
mtr-u.5
for
11432004
sly-u.5
for
101256394
osa-u.5
for
4330861
osa-u.5
for
4340065
zma-u.5
for
100272427
zma-u.5
for
100191806


Ortholog ID: 3831
Species ath bra bra bna bna ghi ghi cit gma gma vvi vvi ppo ppo mtr mtr sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi cre
Symbol PBA1 LOC103862040 LOC103851976 LOC106375432 LOC106424088 LOC107937945 LOC107906760 LOC102621207 LOC100305513 LOC100793551 LOC100262044 LOC100266463 LOC18107848 LOC7487221 LOC11436076 LOC11432004 LOC101256394 LOC102587439 LOC102592103 LOC107778088 LOC107803244 LOC4340065 LOC4330861 LOC100272427 LOC100191806 LOC123087934 LOC123183224 LOC123413517 LOC123451387 LOC8070706 LOC8057854 LOC100830544 CHLRE_06g279000v5
Function* N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 uncharacterized LOC100305513 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6-like proteasome subunit beta type-6-like proteasome subunit beta type-6-like proteasome subunit beta type-6 proteasome subunit beta type-6 uncharacterized LOC100272427 uncharacterized LOC100191806 proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6-like proteasome subunit beta type-6-like proteasome subunit beta type-6 proteasome subunit beta type-6 proteasome subunit beta type-6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 8
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 13
bna04141 Protein processing in endoplasmic reticulum 4
bna03060 Protein export 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 15
bna04141 Protein processing in endoplasmic reticulum 4
bna03060 Protein export 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 12
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 12
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 18
gma04016 MAPK signaling pathway - plant 2
gma04070 Phosphatidylinositol signaling system 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 15
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 9
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 15
osa03040 Spliceosome 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 10
zma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 14
hvu00020 Citrate cycle (TCA cycle) 2
hvu00190 Oxidative phosphorylation 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 12
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829257 103862040 103851976 106375432 106424088 107937945 107906760 102621207 100305513 100793551 100262044 100266463 18107848 7487221 11436076 11432004 101256394 102587439 102592103 107778088 107803244 4340065 4330861 100272427 100191806 123087934 123183224 123413517 123451387 8070706 8057854 100830544 5720872
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