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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   HCF153   high chlorophyll fluorescence 153 
 ath-r.7   HCF153   high chlorophyll fluorescence 153 
 ath-m.9   HCF153   high chlorophyll fluorescence 153 
 ath-e.2   HCF153   high chlorophyll fluorescence 153 
 ath-m.4.bio   HCF153   high chlorophyll fluorescence 153 
 ath-m.4.hor   HCF153   high chlorophyll fluorescence 153 
 ath-m.4.lig   HCF153   high chlorophyll fluorescence 153 
 ath-m.4.str   HCF153   high chlorophyll fluorescence 153 
 ath-m.4.tis   HCF153   high chlorophyll fluorescence 153 
 bra-r.6   103862065   uncharacterized LOC103862065 
 bra-r.6   103851744   uncharacterized LOC103851744 
 bna-r.1   106371456   uncharacterized LOC106371456 
 bna-r.1   BNAA03G51600D   uncharacterized BNAA03G51600D 
 bna-r.1   BNAC07G43330D   uncharacterized BNAC07G43330D 
 ghi-r.1   107931801   uncharacterized LOC107931801 
 ghi-r.1   107936335   uncharacterized LOC107936335 
 cit-r.1   102617584   uncharacterized LOC102617584 
 gma-u.5   100797970   uncharacterized LOC100797970 
 vvi-u.5   100256905   uncharacterized LOC100256905 
 ppo-u.5   7496022   uncharacterized LOC7496022 
 mtr-u.5   11418577   uncharacterized LOC11418577 
 sly-u.5   101258592   HIGH CHLOROPHYLL FLUORESCENCE 153-like protein 
 sot-r.1   102591318   uncharacterized LOC102591318 
 nta-r.1   107770066   uncharacterized LOC107770066 
 nta-r.1   107800252   uncharacterized LOC107800252 
 osa-u.5   4326517   uncharacterized LOC4326517 
 zma-u.5   100277443   high chlorophyll fluorescence 153 
 zma-u.5   103636299   high chlorophyll fluorescence 153 
 tae-r.2   123063414   uncharacterized LOC123063414 
 tae-r.2   123080637   uncharacterized LOC123080637 
 tae-r.2   123072400   uncharacterized LOC123072400 
 hvu-r.1   123445452   uncharacterized LOC123445452 
 sbi-r.1   8081322   uncharacterized LOC8081322 
 bdi-r.1   104582947   uncharacterized LOC104582947 

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Top 50 coexpressed genes to HCF153 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HCF153 (ath-u.5 coexpression data)

CoexMap"829283"


athHCF153 | Entrez gene ID : 829283      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 1 1 1 1 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010190 [list] [network] cytochrome b6f complex assembly  (8 genes)  IMP  
GO CC
GO:0042651 [list] [network] thylakoid membrane  (348 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_194884.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_194884.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_194884.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
HCF153
ath-r.7
for
HCF153
ath-m.9
for
HCF153
ath-e.2
for
HCF153
ath-m.4.bio
for
HCF153
ath-m.4.hor
for
HCF153
ath-m.4.lig
for
HCF153
ath-m.4.str
for
HCF153
ath-m.4.tis
for
HCF153
bra-r.6
for
103862065
bra-r.6
for
103851744
bna-r.1
for
106371456
bna-r.1
for
BNAA03G51600D
bna-r.1
for
BNAC07G43330D
ghi-r.1
for
107931801
ghi-r.1
for
107936335
cit-r.1
for
102617584
gma-u.5
for
100797970
vvi-u.5
for
100256905
ppo-u.5
for
7496022
mtr-u.5
for
11418577
sly-u.5
for
101258592
sot-r.1
for
102591318
nta-r.1
for
107770066
nta-r.1
for
107800252
osa-u.5
for
4326517
zma-u.5
for
100277443
zma-u.5
for
103636299
tae-r.2
for
123063414
tae-r.2
for
123080637
tae-r.2
for
123072400
hvu-r.1
for
123445452
sbi-r.1
for
8081322
bdi-r.1
for
104582947


Ortholog ID: 9057
Species ath bra bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol HCF153 LOC103862065 LOC103851744 LOC106371456 BNAC07G43330D BNAC01G06890D LOC107931801 LOC107936335 LOC102617584 LOC100797970 LOC100256905 LOC7496022 LOC11418577 LOC101258592 LOC102591318 LOC107770066 LOC107800252 LOC4326517 LOC100277443 LOC103636299 LOC123063414 LOC123080637 LOC123072400 LOC123445452 LOC8081322 LOC104582947
Function* high chlorophyll fluorescence 153 uncharacterized LOC103862065 uncharacterized LOC103851744 uncharacterized LOC106371456 uncharacterized BNAC07G43330D uncharacterized BNAC01G06890D uncharacterized LOC107931801 uncharacterized LOC107936335 uncharacterized LOC102617584 uncharacterized LOC100797970 uncharacterized LOC100256905 uncharacterized LOC7496022 uncharacterized LOC11418577 HIGH CHLOROPHYLL FLUORESCENCE 153-like protein uncharacterized LOC102591318 uncharacterized LOC107770066 uncharacterized LOC107800252 uncharacterized LOC4326517 high chlorophyll fluorescence 153 high chlorophyll fluorescence 153 uncharacterized LOC123063414 uncharacterized LOC123080637 uncharacterized LOC123072400 uncharacterized LOC123445452 uncharacterized LOC8081322 uncharacterized LOC104582947
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00906 Carotenoid biosynthesis 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829283 103862065 103851744 106371456 106408976 106374234 107931801 107936335 102617584 100797970 100256905 7496022 11418577 101258592 102591318 107770066 107800252 4326517 100277443 103636299 123063414 123080637 123072400 123445452 8081322 104582947
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