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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ABF3   abscisic acid responsive elements-binding factor 3 
 ath-r.7   ABF3   abscisic acid responsive elements-binding factor 3 
 ath-m.9   ABF3   abscisic acid responsive elements-binding factor 3 
 ath-e.2   ABF3   abscisic acid responsive elements-binding factor 3 
 ath-m.4.bio   ABF3   abscisic acid responsive elements-binding factor 3 
 ath-m.4.hor   ABF3   abscisic acid responsive elements-binding factor 3 
 ath-m.4.lig   ABF3   abscisic acid responsive elements-binding factor 3 
 ath-m.4.str   ABF3   abscisic acid responsive elements-binding factor 3 
 ath-m.4.tis   ABF3   abscisic acid responsive elements-binding factor 3 
 ath-u.5   ABF4   ABRE binding factor 4 
 ath-u.5   ABF2   abscisic acid responsive elements-binding factor 2 
 ath-u.5   ABF1   abscisic acid responsive element-binding factor 1 
 bra-r.6   103848367   ABSCISIC ACID-INSENSITIVE 5-like protein 5 
 bra-r.6   103871400   ABSCISIC ACID-INSENSITIVE 5-like protein 4 
 bra-r.6   103869470   ABSCISIC ACID-INSENSITIVE 5-like protein 7 
 bna-r.1   111204764   ABSCISIC ACID-INSENSITIVE 5-like protein 7 
 bna-r.1   111198524   ABSCISIC ACID-INSENSITIVE 5-like protein 5 
 bna-r.1   106422579   ABSCISIC ACID-INSENSITIVE 5-like protein 5 
 ghi-r.1   107957550   bZIP transcription factor 23 
 ghi-r.1   107897053   bZIP transcription factor 23 
 ghi-r.1   107905577   ABSCISIC ACID-INSENSITIVE 5-like protein 5 
 cit-r.1   102618173   bZIP transcription factor 23 
 cit-r.1   102608792   bZIP transcription factor TRAB1-like 
 gma-u.5   BZIP1   bZIP transcription factor 1 
 gma-u.5   BZIP71   transcription factor bZIP71 
 gma-u.5   100776600   ABSCISIC ACID-INSENSITIVE 5-like protein 4 
 vvi-u.5   100243434   bZIP transcription factor 46 
 vvi-u.5   GRIP55   ripening-related bZIP protein-like 
 ppo-u.5   18104883   ABSCISIC ACID-INSENSITIVE 5-like protein 5 
 ppo-u.5   18097783   ABSCISIC ACID-INSENSITIVE 5-like protein 7 
 ppo-u.5   7490036   ABSCISIC ACID-INSENSITIVE 5-like protein 7 
 mtr-u.5   11446220   ABSCISIC ACID-INSENSITIVE 5-like protein 7 
 mtr-u.5   11435200   bZIP transcription factor 46 
 sly-u.5   101263766   ABSCISIC ACID-INSENSITIVE 5-like protein 7 
 sly-u.5   ABF4   ABA responsive transcription factor 
 sly-u.5   AREB1   ABA-response element binding factor AREB1 
 sot-r.1   102577461   ABRE binding factor 
 sot-r.1   102597983   ABSCISIC ACID-INSENSITIVE 5-like protein 4 
 sot-r.1   102591655   ABSCISIC ACID-INSENSITIVE 5-like protein 7 
 nta-r.1   107824387   bZIP transcription factor TRAB1-like 
 nta-r.1   107766940   ABSCISIC ACID-INSENSITIVE 5-like protein 6 
 nta-r.1   107770065   ABSCISIC ACID-INSENSITIVE 5-like protein 4 
 osa-u.5   4345807   bZIP transcription factor TRAB1-like 
 osa-u.5   4347257   bZIP transcription factor TRAB1-like 
 osa-u.5   4330838   bZIP transcription factor 23-like 
 zma-u.5   100216617   uncharacterized LOC100216617 
 zma-u.5   100193967   uncharacterized LOC100193967 
 zma-u.5   100283578   uncharacterized LOC100283578 
 tae-r.2   123112190   bZIP transcription factor TRAB1 
 tae-r.2   123128583   bZIP transcription factor 23 
 tae-r.2   123138454   bZIP transcription factor 23 
 hvu-r.1   123401320   bZIP transcription factor 23 
 hvu-r.1   123398640   bZIP transcription factor TRAB1-like 
 hvu-r.1   123411187   bZIP transcription factor 46-like 
 sbi-r.1   110437038   bZIP transcription factor TRAB1-like 
 sbi-r.1   8060437   bZIP transcription factor TRAB1 
 sbi-r.1   8075201   bZIP transcription factor 23 
 bdi-r.1   100833178   bZIP transcription factor 23 
 bdi-r.1   100836269   bZIP transcription factor TRAB1 
 bdi-r.1   100845340   bZIP transcription factor TRAB1 

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Top 50 coexpressed genes to ABF3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ABF3 (ath-u.5 coexpression data)

CoexMap"829547"


athABF3 | Entrez gene ID : 829547      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 3 2 3 2 3 2 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (111 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IDA IEA  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IEP  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS TAS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031785.2 [sequence] [blastp]
NP_001320130.1 [sequence] [blastp]
NP_567949.1 [sequence] [blastp]
NP_849490.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001031785.2)
nucl 6,  cyto 3  (predict for NP_001320130.1)
nucl 6,  cyto 3  (predict for NP_567949.1)
nucl 6,  cyto 3  (predict for NP_849490.2)
Subcellular
localization
TargetP
other 5  (predict for NP_001031785.2)
other 5  (predict for NP_001320130.1)
other 5  (predict for NP_567949.1)
other 5  (predict for NP_849490.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ABF3
ath-r.7
for
ABF3
ath-m.9
for
ABF3
ath-e.2
for
ABF3
ath-m.4.bio
for
ABF3
ath-m.4.hor
for
ABF3
ath-m.4.lig
for
ABF3
ath-m.4.str
for
ABF3
ath-m.4.tis
for
ABF3
ath-u.5
for
ABF4
ath-u.5
for
ABF2
ath-u.5
for
ABF1
bra-r.6
for
103848367
bra-r.6
for
103871400
bra-r.6
for
103869470
bna-r.1
for
111204764
bna-r.1
for
111198524
bna-r.1
for
106422579
ghi-r.1
for
107957550
ghi-r.1
for
107897053
ghi-r.1
for
107905577
cit-r.1
for
102618173
cit-r.1
for
102608792
gma-u.5
for
BZIP1
gma-u.5
for
BZIP71
gma-u.5
for
100776600
vvi-u.5
for
100243434
vvi-u.5
for
GRIP55
ppo-u.5
for
18104883
ppo-u.5
for
18097783
ppo-u.5
for
7490036
mtr-u.5
for
11446220
mtr-u.5
for
11435200
sly-u.5
for
101263766
sly-u.5
for
ABF4
sly-u.5
for
AREB1
sot-r.1
for
102577461
sot-r.1
for
102597983
sot-r.1
for
102591655
nta-r.1
for
107824387
nta-r.1
for
107766940
nta-r.1
for
107770065
osa-u.5
for
4345807
osa-u.5
for
4347257
osa-u.5
for
4330838
zma-u.5
for
100216617
zma-u.5
for
100193967
zma-u.5
for
100283578
tae-r.2
for
123112190
tae-r.2
for
123128583
tae-r.2
for
123138454
hvu-r.1
for
123401320
hvu-r.1
for
123398640
hvu-r.1
for
123411187
sbi-r.1
for
110437038
sbi-r.1
for
8060437
sbi-r.1
for
8075201
bdi-r.1
for
100833178
bdi-r.1
for
100836269
bdi-r.1
for
100845340


Ortholog ID: 880
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol ABF3 ABF2 ABF1 LOC103869470 LOC103859804 LOC103837451 LOC106390804 LOC106346026 LOC125604632 LOC107905577 LOC107908901 LOC107952130 LOC102618173 LOC102608792 BZIP71 LOC100776600 LOC100819313 LOC100243434 GRIP55 LOC18104883 LOC18097783 LOC7462880 LOC11446220 LOC11435200 LOC101263766 ABF4 AREB1 LOC102577461 LOC102597983 LOC102581652 LOC107824387 LOC107807756 LOC107782185 LOC4345807 LOC4347257 LOC4330838 LOC100216617 LOC103643147 LOC100191233 LOC123128583 LOC123149675 LOC123165557 LOC123401320 LOC123398640 LOC123411187 LOC110437038 LOC8060437 LOC8077354 LOC100833178 LOC100845340 LOC100825896
Function* abscisic acid responsive elements-binding factor 3 abscisic acid responsive elements-binding factor 2 abscisic acid responsive element-binding factor 1 ABSCISIC ACID-INSENSITIVE 5-like protein 7 ABSCISIC ACID-INSENSITIVE 5-like protein 7 ABSCISIC ACID-INSENSITIVE 5-like protein 7 ABSCISIC ACID-INSENSITIVE 5-like protein 7 ABSCISIC ACID-INSENSITIVE 5-like protein 6 ABSCISIC ACID-INSENSITIVE 5-like protein 7 ABSCISIC ACID-INSENSITIVE 5-like protein 5 ABSCISIC ACID-INSENSITIVE 5-like protein 7 ABSCISIC ACID-INSENSITIVE 5-like protein 5 bZIP transcription factor 23 bZIP transcription factor TRAB1-like transcription factor bZIP71 ABSCISIC ACID-INSENSITIVE 5-like protein 4 bZIP transcription factor TRAB1 bZIP transcription factor 46 ripening-related bZIP protein-like ABSCISIC ACID-INSENSITIVE 5-like protein 5 ABSCISIC ACID-INSENSITIVE 5-like protein 7 bZIP transcription factor TRAB1 ABSCISIC ACID-INSENSITIVE 5-like protein 7 bZIP transcription factor 46 ABSCISIC ACID-INSENSITIVE 5-like protein 7 ABA responsive transcription factor ABA-response element binding factor AREB1 ABRE binding factor ABSCISIC ACID-INSENSITIVE 5-like protein 4 ABSCISIC ACID-INSENSITIVE 5-like protein 7 bZIP transcription factor TRAB1-like bZIP transcription factor 46-like ABSCISIC ACID-INSENSITIVE 5-like protein 7 bZIP transcription factor TRAB1-like bZIP transcription factor TRAB1-like bZIP transcription factor 23-like uncharacterized LOC100216617 bZIP transcription factor TRAB1 uncharacterized LOC100191233 bZIP transcription factor 23 bZIP transcription factor 46 bZIP transcription factor 46 bZIP transcription factor 23 bZIP transcription factor TRAB1-like bZIP transcription factor 46-like bZIP transcription factor TRAB1-like bZIP transcription factor TRAB1 bZIP transcription factor 23 bZIP transcription factor 23 bZIP transcription factor TRAB1 bZIP transcription factor 46
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
ath04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
ath04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 12
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 10
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 5
cit04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 9
gma04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 8
gma04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 6
vvi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
mtr04016 MAPK signaling pathway - plant 4
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 7
sly04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 7
sly04016 MAPK signaling pathway - plant 5
sly00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00785 Lipoic acid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
nta04016 MAPK signaling pathway - plant 5
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 12
nta04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
osa04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 6
osa04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
osa04016 MAPK signaling pathway - plant 5
osa00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 9
zma04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 11
zma04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 9
tae04016 MAPK signaling pathway - plant 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
hvu04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
hvu04016 MAPK signaling pathway - plant 3
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 7
sbi04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 7
bdi04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 6
bdi04016 MAPK signaling pathway - plant 4
bdi00100 Steroid biosynthesis 2
bdi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829547 841095 841395 103869470 103859804 103837451 106390804 106346026 125604632 107905577 107908901 107952130 102618173 102608792 100101876 100776600 100819313 100243434 100232889 18104883 18097783 7462880 11446220 11435200 101263766 100820704 544204 102577461 102597983 102581652 107824387 107807756 107782185 4345807 4347257 4330838 100216617 103643147 100191233 123128583 123149675 123165557 123401320 123398640 123411187 110437038 8060437 8077354 100833178 100845340 100825896
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