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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G36130   Ribosomal protein L2 family 
 ath-r.7   AT4G36130   Ribosomal protein L2 family 
 ath-e.2   AT4G36130   Ribosomal protein L2 family 
 ath-u.5   EMB2296   Ribosomal protein L2 family 
 bra-r.6   103828437   60S ribosomal protein L8-1 
 bra-r.6   103834984   60S ribosomal protein L8-3 
 bra-r.6   103860698   60S ribosomal protein L8-1 
 bna-r.1   106451593   60S ribosomal protein L8-3-like 
 bna-r.1   106352080   60S ribosomal protein L8-1 
 bna-r.1   111215659   60S ribosomal protein L8-3-like 
 ghi-r.1   107909441   60S ribosomal protein L8-3 
 ghi-r.1   107912033   60S ribosomal protein L8 
 ghi-r.1   107913004   60S ribosomal protein L8-3 
 cit-r.1   102614671   60S ribosomal protein L8-1 
 cit-r.1   102626558   60S ribosomal protein L8 
 gma-u.5   100527838   60S ribosomal protein L8-1 
 gma-u.5   RPL2   ribosomal protein L2 
 gma-u.5   100798311   60S ribosomal protein L8-3 
 vvi-u.5   100258586   60S ribosomal protein L8-like 
 vvi-u.5   100248750   large ribosomal subunit protein uL2 
 vvi-u.5   100247214   large ribosomal subunit protein uL2 
 ppo-u.5   18109328   60S ribosomal protein L8-1 
 ppo-u.5   18109327   60S ribosomal protein L8-1 
 ppo-u.5   18099210   60S ribosomal protein L8-3 
 mtr-u.5   11436934   60S ribosomal protein L8-3 
 mtr-u.5   11424816   60S ribosomal protein L8-3 
 sly-u.5   RPL8   ribosomal protein L2 
 sly-u.5   101264138   large ribosomal subunit protein uL2 
 sly-u.5   101265004   large ribosomal subunit protein uL2 
 sot-r.1   102579483   60S ribosomal protein L8-like 
 sot-r.1   102583499   60S ribosomal protein L8-like 
 nta-r.1   107827527   large ribosomal subunit protein uL2-like 
 nta-r.1   107769978   large ribosomal subunit protein uL2-like 
 nta-r.1   107770869   large ribosomal subunit protein uL2 
 osa-u.5   4352560   large ribosomal subunit protein uL2 
 zma-u.5   100216796   60S ribosomal protein L8 
 zma-u.5   100191681   60S ribosomal protein L8 
 zma-u.5   110485087   uncharacterized LOC110485087 
 tae-r.2   123086412   60S ribosomal protein L8 
 tae-r.2   123091632   60S ribosomal protein L8 
 hvu-r.1   123400024   60S ribosomal protein L8 
 sbi-r.1   8057923   60S ribosomal protein L8 
 sbi-r.1   8068949   60S ribosomal protein L8 
 sbi-r.1   110429626   60S ribosomal protein L8 
 bdi-r.1   100835896   60S ribosomal protein L8 
 cre-r.1   CHLRE_12g535851v5   ribosomal protein L8 

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Top 50 coexpressed genes to AT4G36130 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G36130 (ath-u.5 coexpression data)

CoexMap"829770"


athAT4G36130 | Entrez gene ID : 829770    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 3 3 2 3 2 3 1 3 2 1 3 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_195336.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  mito 1  (predict for NP_195336.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_195336.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G36130
ath-r.7
for
AT4G36130
ath-e.2
for
AT4G36130
ath-u.5
for
EMB2296
bra-r.6
for
103828437
bra-r.6
for
103834984
bra-r.6
for
103860698
bna-r.1
for
106451593
bna-r.1
for
106352080
bna-r.1
for
111215659
ghi-r.1
for
107909441
ghi-r.1
for
107912033
ghi-r.1
for
107913004
cit-r.1
for
102614671
cit-r.1
for
102626558
gma-u.5
for
100527838
gma-u.5
for
RPL2
gma-u.5
for
100798311
vvi-u.5
for
100258586
vvi-u.5
for
100248750
vvi-u.5
for
100247214
ppo-u.5
for
18109328
ppo-u.5
for
18109327
ppo-u.5
for
18099210
mtr-u.5
for
11436934
mtr-u.5
for
11424816
sly-u.5
for
RPL8
sly-u.5
for
101264138
sly-u.5
for
101265004
sot-r.1
for
102579483
sot-r.1
for
102583499
nta-r.1
for
107827527
nta-r.1
for
107769978
nta-r.1
for
107770869
osa-u.5
for
4352560
zma-u.5
for
100216796
zma-u.5
for
100191681
zma-u.5
for
110485087
tae-r.2
for
123086412
tae-r.2
for
123091632
hvu-r.1
for
123400024
sbi-r.1
for
8057923
sbi-r.1
for
8068949
sbi-r.1
for
110429626
bdi-r.1
for
100835896
cre-r.1
for
CHLRE_12g535851v5


Ortholog ID: 1564
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot nta nta nta osa zma zma zma tae tae hvu sbi sbi sbi bdi cre
Symbol AT4G36130 EMB2296 LOC103834984 LOC103874169 LOC103870340 LOC111215659 LOC106349324 LOC106444349 LOC107914264 LOC107897605 LOC107914262 LOC102614671 LOC102626558 RPL2 LOC100798311 LOC100802137 LOC100258586 LOC100248750 LOC100247214 LOC18109328 LOC18109327 LOC18099210 LOC11436934 LOC11424816 RPL8 LOC101264138 LOC101265004 LOC102579483 LOC102583499 LOC107785477 LOC107796773 LOC107816448 LOC4352560 LOC100216796 LOC100191681 LOC110485087 LOC123102523 LOC123110702 LOC123400024 LOC8057923 LOC8068949 LOC110430595 LOC100835896 CHLRE_12g535851v5
Function* Ribosomal protein L2 family Ribosomal protein L2 family 60S ribosomal protein L8-3 60S ribosomal protein L8-1 60S ribosomal protein L8-3 60S ribosomal protein L8-3-like 60S ribosomal protein L8-3-like 60S ribosomal protein L8-2 60S ribosomal protein L8-3 60S ribosomal protein L8-3 60S ribosomal protein L8-3 60S ribosomal protein L8-1 60S ribosomal protein L8 ribosomal protein L2 60S ribosomal protein L8-3 60S ribosomal protein L8-3 60S ribosomal protein L8-like large ribosomal subunit protein uL2 large ribosomal subunit protein uL2 60S ribosomal protein L8-1 60S ribosomal protein L8-1 60S ribosomal protein L8-3 60S ribosomal protein L8-3 60S ribosomal protein L8-3 ribosomal protein L2 large ribosomal subunit protein uL2 large ribosomal subunit protein uL2 60S ribosomal protein L8-like 60S ribosomal protein L8-like large ribosomal subunit protein uL2-like large ribosomal subunit protein uL2 60S ribosomal protein L8-like large ribosomal subunit protein uL2 60S ribosomal protein L8 60S ribosomal protein L8 uncharacterized LOC110485087 60S ribosomal protein L8 60S ribosomal protein L8 60S ribosomal protein L8 60S ribosomal protein L8 60S ribosomal protein L8 60S ribosomal protein L8-like 60S ribosomal protein L8 ribosomal protein L8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma04120 Ubiquitin mediated proteolysis 4
gma04145 Phagosome 2
gma04517 IgSF CAM signaling 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
gma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma04120 Ubiquitin mediated proteolysis 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi00260 Glycine, serine and threonine metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi04120 Ubiquitin mediated proteolysis 5
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi04120 Ubiquitin mediated proteolysis 6
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829770 816314 103834984 103874169 103870340 111215659 106349324 106444349 107914264 107897605 107914262 102614671 102626558 547677 100798311 100802137 100258586 100248750 100247214 18109328 18109327 18099210 11436934 11424816 544079 101264138 101265004 102579483 102583499 107785477 107796773 107816448 4352560 100216796 100191681 110485087 123102523 123110702 123400024 8057923 8068949 110430595 100835896 5718493
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