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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G38495   chromatin-remodeling complex subunit 
 ath-r.7   AT4G38495   chromatin-remodeling complex subunit 
 ath-e.2   AT4G38495   chromatin-remodeling complex subunit 
 gma-u.5   100775452   chromatin-remodeling complex subunit ies6 
 vvi-u.5   100260691   protein EIN6 ENHANCER 
 ppo-u.5   7460404   protein EIN6 ENHANCER 
 mtr-u.5   11427000   chromatin-remodeling complex subunit ies6 
 sly-u.5   101248581   protein EIN6 ENHANCER 
 osa-u.5   4335351   protein EIN6 ENHANCER 
 zma-u.5   100280831   nucleus protein 

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Top 50 coexpressed genes to AT4G38495 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G38495 (ath-u.5 coexpression data)

CoexMap"830006"


athAT4G38495 | Entrez gene ID : 830006      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03082 [list] [network] ATP-dependent chromatin remodeling (64 genes)
GO BP
GO:0010104 [list] [network] regulation of ethylene-activated signaling pathway  (30 genes)  IMP  
GO:0010628 [list] [network] positive regulation of gene expression  (71 genes)  IMP  
GO:0009723 [list] [network] response to ethylene  (170 genes)  NAS  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (174 genes)  IMP  
GO:0006338 [list] [network] chromatin remodeling  (210 genes)  IMP  
GO CC
GO:0031011 [list] [network] Ino80 complex  (16 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_849518.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  cyto 1,  nucl_plas 1  (predict for NP_849518.1)
Subcellular
localization
TargetP
other 8  (predict for NP_849518.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G38495

.
ath-r.7
for
AT4G38495

.
ath-e.2
for
AT4G38495

.
gma-u.5
for
100775452

.
vvi-u.5
for
100260691

.
ppo-u.5
for
7460404

.
mtr-u.5
for
11427000

.
sly-u.5
for
101248581

.
osa-u.5
for
4335351

.
zma-u.5
for
100280831

.


Ortholog ID: 10266
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G38495 LOC100775452 LOC101248581 LOC4335351 LOC100280831 LOC103844367 LOC103853645 LOC100260691 LOC7460404 LOC11427000 LOC123051296 LOC123187248 LOC123424501 LOC107934148 LOC107928800 LOC106438688 LOC111203940 LOC8086465 LOC102580479 LOC102617798 LOC100844240 LOC107826521 LOC107815792
Function* chromatin-remodeling complex subunit chromatin-remodeling complex subunit ies6 protein EIN6 ENHANCER protein EIN6 ENHANCER nucleus protein uncharacterized LOC103844367 chromatin-remodeling complex subunit ies6 protein EIN6 ENHANCER protein EIN6 ENHANCER chromatin-remodeling complex subunit ies6 chromatin-remodeling complex subunit ies6 chromatin-remodeling complex subunit ies6 chromatin-remodeling complex subunit ies6 INO80 complex subunit C INO80 complex subunit C chromatin-remodeling complex subunit ies6 chromatin-remodeling complex subunit ies6-like chromatin-remodeling complex subunit ies6 chromatin-remodeling complex subunit ies6 protein EIN6 ENHANCER INO80 complex subunit C protein EIN6 ENHANCER-like protein EIN6 ENHANCER-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath04130 SNARE interactions in vesicular transport 2
ath03083 Polycomb repressive complex 2
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
zma03020 RNA polymerase 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03008 Ribosome biogenesis in eukaryotes 3
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
bra03082 ATP-dependent chromatin remodeling 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 5
tae03040 Spliceosome 5
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03040 Spliceosome 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
bdi03420 Nucleotide excision repair 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03040 Spliceosome 2
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
nta03082 ATP-dependent chromatin remodeling 3
nta00061 Fatty acid biosynthesis 2
nta00062 Fatty acid elongation 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 8
nta03082 ATP-dependent chromatin remodeling 3
nta00061 Fatty acid biosynthesis 2
nta00062 Fatty acid elongation 2
nta01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830006 100775452 101248581 4335351 100280831 103844367 103853645 100260691 7460404 11427000 123051296 123187248 123424501 107934148 107928800 106438688 111203940 8086465 102580479 102617798 100844240 107826521 107815792
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