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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   DPA4   AP2/B3-like transcriptional factor family protein 
 ath-m.4.bio   DPA4   AP2/B3-like transcriptional factor family protein 
 ath-m.4.hor   DPA4   AP2/B3-like transcriptional factor family protein 
 ath-m.4.lig   DPA4   AP2/B3-like transcriptional factor family protein 
 ath-m.4.str   DPA4   AP2/B3-like transcriptional factor family protein 
 ath-m.4.tis   DPA4   AP2/B3-like transcriptional factor family protein 
 ath-u.5   ABS2   AP2/B3-like transcriptional factor family protein 
 ath-u.5   AT3G11580   AP2/B3-like transcriptional factor family protein 
 bra-r.6   103849927   B3 domain-containing protein At3g11580 
 bra-r.6   103855664   B3 domain-containing protein At5g06250 
 bra-r.6   103859399   B3 domain-containing protein At3g11580 
 bna-r.1   106452488   B3 domain-containing protein At3g11580 
 bna-r.1   125585487   B3 domain-containing protein At2g36080-like 
 bna-r.1   106353056   B3 domain-containing protein At3g11580 
 ghi-r.1   107925562   B3 domain-containing protein At2g36080 
 ghi-r.1   107928165   B3 domain-containing protein At2g36080 
 ghi-r.1   107948253   B3 domain-containing protein At2g36080 
 cit-r.1   102606783   B3 domain-containing protein At2g36080 
 gma-u.5   100802734   B3 domain-containing protein At2g36080 
 gma-u.5   100795470   B3 domain-containing protein At2g36080 
 gma-u.5   100781153   B3 domain-containing protein At2g36080 
 vvi-u.5   100245964   B3 domain-containing protein At2g36080 
 mtr-u.5   25499421   B3 domain-containing protein At2g36080 
 mtr-u.5   25483770   B3 domain-containing protein At5g06250 
 sly-u.5   101257504   B3 domain-containing protein At2g36080-like 
 sly-u.5   101254147   B3 domain-containing protein At2g36080-like 
 sot-r.1   102586434   B3 domain-containing protein At2g36080-like 
 sot-r.1   102578582   B3 domain-containing protein At2g36080 
 nta-r.1   107773879   B3 domain-containing protein At2g36080 
 nta-r.1   107792993   B3 domain-containing protein At2g36080 
 nta-r.1   107796617   B3 domain-containing protein At2g36080-like 
 zma-u.5   100501773   B3 domain-containing protein 
 tae-r.2   123054577   B3 domain-containing protein Os11g0156000 
 hvu-r.1   123398365   B3 domain-containing protein Os11g0156000-like 
 bdi-r.1   100824846   B3 domain-containing protein Os11g0156000 

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Top 50 coexpressed genes to DPA4 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DPA4 (ath-m.9 coexpression data)

CoexMap"830512"


athDPA4 | Entrez gene ID : 830512      
Species ath bra bna ghi cit gma vvi mtr sly sot nta zma tae hvu bdi ppo cre sbi osa
Paralog 8 3 3 3 1 3 1 2 2 2 3 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010358 [list] [network] leaf shaping  (8 genes)  IGI  
GO:0010073 [list] [network] meristem maintenance  (197 genes)  IMP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (200 genes)  IMP  
GO:0048507 [list] [network] meristem development  (276 genes)  IGI  
GO:0048366 [list] [network] leaf development  (371 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IEA ISS  
Protein NP_001119177.1 [sequence] [blastp]
NP_001331850.1 [sequence] [blastp]
NP_001331851.1 [sequence] [blastp]
NP_001331852.1 [sequence] [blastp]
NP_196243.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  chlo 1  (predict for NP_001119177.1)
nucl 8,  cyto_nucl 4,  chlo 1  (predict for NP_001331850.1)
nucl 8,  cyto_nucl 4,  chlo 1  (predict for NP_001331851.1)
nucl 9,  chlo 1  (predict for NP_001331852.1)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for NP_196243.2)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001119177.1)
other 6,  mito 3  (predict for NP_001331850.1)
other 6,  mito 3  (predict for NP_001331851.1)
other 6,  mito 3  (predict for NP_001331852.1)
other 6,  mito 3  (predict for NP_196243.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
DPA4
ath-m.4.bio
for
DPA4
ath-m.4.hor
for
DPA4
ath-m.4.lig
for
DPA4
ath-m.4.str
for
DPA4
ath-m.4.tis
for
DPA4
ath-u.5
for
ABS2
ath-u.5
for
AT3G11580
bra-r.6
for
103849927
bra-r.6
for
103855664
bra-r.6
for
103859399
bna-r.1
for
106452488
bna-r.1
for
125585487
bna-r.1
for
106353056
ghi-r.1
for
107925562
ghi-r.1
for
107928165
ghi-r.1
for
107948253
cit-r.1
for
102606783
gma-u.5
for
100802734
gma-u.5
for
100795470
gma-u.5
for
100781153
vvi-u.5
for
100245964
mtr-u.5
for
25499421
mtr-u.5
for
25483770
sly-u.5
for
101257504
sly-u.5
for
101254147
sot-r.1
for
102586434
sot-r.1
for
102578582
nta-r.1
for
107773879
nta-r.1
for
107792993
nta-r.1
for
107796617
zma-u.5
for
100501773
tae-r.2
for
123054577
hvu-r.1
for
123398365
bdi-r.1
for
100824846


Ortholog ID: 2074
Species ath ath bra bra bra bna bna ghi ghi ghi cit gma gma gma vvi mtr mtr sly sly sot sot nta nta nta zma tae tae hvu bdi
Symbol ABS2 AT3G11580 LOC103855664 LOC103870330 LOC103846962 LOC106452488 LOC125606404 LOC107925562 LOC107928165 LOC107896327 LOC102606783 LOC100802734 LOC100795470 LOC100781153 LOC100245964 LOC25499421 LOC25483770 LOC101257504 LOC101254147 LOC102586434 LOC102578582 LOC107773879 LOC107792993 LOC107796617 LOC100501773 LOC123120158 LOC123102986 LOC123398365 LOC100824846
Function* AP2/B3-like transcriptional factor family protein AP2/B3-like transcriptional factor family protein B3 domain-containing protein At5g06250 B3 domain-containing protein At3g11580 B3 domain-containing protein At5g06250 B3 domain-containing protein At3g11580 B3 domain-containing protein At2g36080-like B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At5g06250 B3 domain-containing protein At2g36080-like B3 domain-containing protein At2g36080-like B3 domain-containing protein At2g36080-like B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080 B3 domain-containing protein At2g36080-like B3 domain-containing protein B3 domain-containing protein Os11g0156000 B3 domain-containing protein Os11g0156000 B3 domain-containing protein Os11g0156000-like B3 domain-containing protein Os11g0156000
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 3
bra00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 5
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
vvi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 7
sot04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818181 820331 103855664 103870330 103846962 106452488 125606404 107925562 107928165 107896327 102606783 100802734 100795470 100781153 100245964 25499421 25483770 101257504 101254147 102586434 102578582 107773879 107792993 107796617 100501773 123120158 123102986 123398365 100824846
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