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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   MEF7   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   MEF7   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   MEF7   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   MEF7   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   MEF7   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   MEF7   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   MEF7   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   MEF7   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   MEF7   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100800858   putative pentatricopeptide repeat-containing protein At5g09950 
 vvi-u.5   104880926   putative pentatricopeptide repeat-containing protein At5g09950 
 ppo-u.5   18104611   putative pentatricopeptide repeat-containing protein At5g09950 
 mtr-u.5   11440636   putative pentatricopeptide repeat-containing protein At5g09950 
 sly-u.5   101263828   putative pentatricopeptide repeat-containing protein At5g09950 
 osa-u.5   107277967   putative pentatricopeptide repeat-containing protein At5g09950 
 zma-u.5   103651544   putative pentatricopeptide repeat-containing protein At5g09950 

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Top 50 coexpressed genes to MEF7 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MEF7 (ath-u.5 coexpression data)

CoexMap"830856"


athMEF7 | Entrez gene ID : 830856      
Species ath gma vvi ppo mtr sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (230 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001318522.1 [sequence] [blastp]
NP_001330962.1 [sequence] [blastp]
NP_196557.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001318522.1)
chlo 5,  chlo_mito 4,  mito 2,  nucl 1  (predict for NP_001330962.1)
chlo 10  (predict for NP_196557.1)
Subcellular
localization
TargetP
mito 2  (predict for NP_001318522.1)
mito 8  (predict for NP_001330962.1)
mito 2  (predict for NP_196557.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
MEF7

.
ath-r.7
for
MEF7

.
ath-m.9
for
MEF7

.
ath-e.2
for
MEF7

.
ath-m.4.bio
for
MEF7

.
ath-m.4.hor
for
MEF7

.
ath-m.4.lig
for
MEF7

.
ath-m.4.str
for
MEF7

.
ath-m.4.tis
for
MEF7

.
gma-u.5
for
100800858

.
vvi-u.5
for
104880926

.
ppo-u.5
for
18104611

.
mtr-u.5
for
11440636

.
sly-u.5
for
101263828

.
osa-u.5
for
107277967

.
zma-u.5
for
103651544

.


Ortholog ID: 11400
Species ath gma sly osa zma bra vvi ppo mtr hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol MEF7 LOC100800858 LOC101263828 LOC107277967 LOC103651544 LOC103867741 LOC104880926 LOC18104611 LOC11440636 LOC123443800 LOC107912455 LOC107923975 LOC106396160 LOC106421164 LOC8082169 LOC102595258 LOC102618758 LOC100831546 LOC107773724 LOC107807435
Function* Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At5g09950
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03020 RNA polymerase 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu01230 Biosynthesis of amino acids 2
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830856 100800858 101263828 107277967 103651544 103867741 104880926 18104611 11440636 123443800 107912455 107923975 106396160 106421164 8082169 102595258 102618758 100831546 107773724 107807435
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