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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   TPR13   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   TPR13   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   TPR13   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   TPR13   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   TPR13   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   TPR13   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   TPR14   tetratricopeptide repeat (TPR)-containing protein 
 gma-u.5   100814381   TPR repeat-containing thioredoxin TTL1 
 vvi-u.5   100242128   TPR repeat-containing thioredoxin TTL1 
 vvi-u.5   100854530   TPR repeat-containing thioredoxin TTL1 
 ppo-u.5   7456916   inactive TPR repeat-containing thioredoxin TTL3 
 ppo-u.5   7468901   TPR repeat-containing thioredoxin TTL1 
 mtr-u.5   11433042   TPR repeat-containing thioredoxin TTL1 
 mtr-u.5   25489433   inactive TPR repeat-containing thioredoxin TTL3 
 sly-u.5   101262205   inactive TPR repeat-containing thioredoxin TTL3-like 
 osa-u.5   4330757   inactive TPR repeat-containing thioredoxin TTL3 
 zma-u.5   103654247   TPR repeat-containing thioredoxin TTL4 
 zma-u.5   103627755   TPR repeat-containing thioredoxin TTL4 

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Top 50 coexpressed genes to TPR13 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TPR13 (ath-m.9 coexpression data)

CoexMap"830873"


athTPR13 | Entrez gene ID : 830873      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 7 1 2 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_196571.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  cyto 1,  mito_plas 1  (predict for NP_196571.1)
Subcellular
localization
TargetP
other 5  (predict for NP_196571.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
TPR13
ath-m.4.bio
for
TPR13
ath-m.4.hor
for
TPR13
ath-m.4.lig
for
TPR13
ath-m.4.str
for
TPR13
ath-m.4.tis
for
TPR13
ath-u.5
for
TPR14
gma-u.5
for
100814381
vvi-u.5
for
100242128
vvi-u.5
for
100854530
ppo-u.5
for
7456916
ppo-u.5
for
7468901
mtr-u.5
for
11433042
mtr-u.5
for
25489433
sly-u.5
for
101262205
osa-u.5
for
4330757
zma-u.5
for
103654247
zma-u.5
for
103627755


Ortholog ID: 2754
Species ath bra ghi cit gma vvi vvi mtr mtr sly sot nta nta osa zma zma tae hvu sbi bdi
Symbol TPR14 LOC103873942 LOC107899690 LOC102612550 LOC100811282 LOC100854530 LOC100242128 LOC25489433 LOC11433042 LOC101262205 LOC102589469 LOC107819074 LOC107782825 LOC4330757 LOC103654247 LOC103627755 LOC123130955 LOC123403033 LOC8066406 LOC100842355
Function* tetratricopeptide repeat (TPR)-containing protein inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL4 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3-like TPR repeat-containing thioredoxin TTL4-like TPR repeat-containing thioredoxin TTL4 TPR repeat-containing thioredoxin TTL4-like inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL4 TPR repeat-containing thioredoxin TTL4 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL4-like inactive TPR repeat-containing thioredoxin TTL3 inactive TPR repeat-containing thioredoxin TTL3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00750 Vitamin B6 metabolism 2
bra01240 Biosynthesis of cofactors 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 7
ghi04981 Folate transport and metabolism 7
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit00330 Arginine and proline metabolism 2
cit00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot04145 Phagosome 2
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00190 Oxidative phosphorylation 3
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00941 Flavonoid biosynthesis 3
bdi00944 Flavone and flavonol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836639 103873942 107899690 102612550 100811282 100854530 100242128 25489433 11433042 101262205 102589469 107819074 107782825 4330757 103654247 103627755 123130955 123403033 8066406 100842355
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