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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G11840   YCF36, putative (DUF1230) 
 ath-r.7   AT5G11840   YCF36, putative (DUF1230) 
 ath-m.9   AT5G11840   YCF36, putative (DUF1230) 
 ath-e.2   AT5G11840   YCF36, putative (DUF1230) 
 ath-m.4.bio   AT5G11840   YCF36, putative (DUF1230) 
 ath-m.4.hor   AT5G11840   YCF36, putative (DUF1230) 
 ath-m.4.lig   AT5G11840   YCF36, putative (DUF1230) 
 ath-m.4.str   AT5G11840   YCF36, putative (DUF1230) 
 ath-m.4.tis   AT5G11840   YCF36, putative (DUF1230) 
 bra-r.6   103855936   uncharacterized protein ycf36 
 bna-r.1   106420235   uncharacterized protein ycf36-like 
 bna-r.1   106358516   uncharacterized protein ycf36 
 ghi-r.1   107958884   uncharacterized protein ycf36 
 ghi-r.1   107907002   uncharacterized protein ycf36 
 cit-r.1   102628907   hypothetical protein 
 gma-u.5   100818101   uncharacterized protein ycf36 
 vvi-u.5   100260970   uncharacterized protein ycf36 
 ppo-u.5   7470703   uncharacterized protein ycf36 
 mtr-u.5   11417176   uncharacterized protein ycf36 
 sly-u.5   101260364   uncharacterized protein ycf36 
 sot-r.1   102596278   uncharacterized protein ycf36 
 nta-r.1   107802749   uncharacterized protein ycf36-like 
 nta-r.1   107820466   uncharacterized protein ycf36 
 osa-u.5   4339462   uncharacterized protein ycf36 
 zma-u.5   103635266   DUF1230 family protein 
 tae-r.2   123142695   uncharacterized protein ycf36 
 tae-r.2   123065078   uncharacterized protein ycf36 
 tae-r.2   123182815   uncharacterized protein ycf36 
 hvu-r.1   123448249   protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic-like 
 sbi-r.1   8061072   uncharacterized protein ycf36 
 bdi-r.1   100833565   uncharacterized protein ycf36 

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Top 50 coexpressed genes to AT5G11840 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G11840 (ath-u.5 coexpression data)

CoexMap"831057"


athAT5G11840 | Entrez gene ID : 831057      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001331148.1 [sequence] [blastp]
NP_001331149.1 [sequence] [blastp]
NP_001331150.1 [sequence] [blastp]
NP_196745.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  nucl 1,  mito 1  (predict for NP_001331148.1)
chlo 8,  extr 1  (predict for NP_001331149.1)
chlo 7,  extr 1,  nucl 1,  mito 1  (predict for NP_001331150.1)
chlo 8,  E.R. 1  (predict for NP_196745.4)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001331148.1)
chlo 9  (predict for NP_001331149.1)
chlo 9  (predict for NP_001331150.1)
chlo 9  (predict for NP_196745.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G11840
ath-r.7
for
AT5G11840
ath-m.9
for
AT5G11840
ath-e.2
for
AT5G11840
ath-m.4.bio
for
AT5G11840
ath-m.4.hor
for
AT5G11840
ath-m.4.lig
for
AT5G11840
ath-m.4.str
for
AT5G11840
ath-m.4.tis
for
AT5G11840
bra-r.6
for
103855936
bna-r.1
for
106420235
bna-r.1
for
106358516
ghi-r.1
for
107958884
ghi-r.1
for
107907002
cit-r.1
for
102628907
gma-u.5
for
100818101
vvi-u.5
for
100260970
ppo-u.5
for
7470703
mtr-u.5
for
11417176
sly-u.5
for
101260364
sot-r.1
for
102596278
nta-r.1
for
107802749
nta-r.1
for
107820466
osa-u.5
for
4339462
zma-u.5
for
103635266
tae-r.2
for
123142695
tae-r.2
for
123065078
tae-r.2
for
123182815
hvu-r.1
for
123448249
sbi-r.1
for
8061072
bdi-r.1
for
100833565


Ortholog ID: 6646
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae sbi bdi
Symbol AT5G11840 LOC103855936 LOC106420235 LOC106358516 LOC107958884 LOC107907002 LOC102628907 LOC100818101 LOC100260970 LOC7470703 LOC11417176 LOC101260364 LOC102596278 LOC107802749 LOC107820466 LOC4339462 LOC103635266 LOC123142695 LOC123065078 LOC123182815 LOC8061072 LOC100833565
Function* YCF36, putative (DUF1230) uncharacterized protein ycf36 uncharacterized protein ycf36-like uncharacterized protein ycf36 uncharacterized protein ycf36 uncharacterized protein ycf36 hypothetical protein uncharacterized protein ycf36 uncharacterized protein ycf36 uncharacterized protein ycf36 uncharacterized protein ycf36 uncharacterized protein ycf36 uncharacterized protein ycf36 uncharacterized protein ycf36-like uncharacterized protein ycf36 uncharacterized protein ycf36 DUF1230 family protein uncharacterized protein ycf36 uncharacterized protein ycf36 uncharacterized protein ycf36 uncharacterized protein ycf36 uncharacterized protein ycf36
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 4
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00195 Photosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 4
mtr00630 Glyoxylate and dicarboxylate metabolism 3
mtr00260 Glycine, serine and threonine metabolism 2
mtr00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
sly04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831057 103855936 106420235 106358516 107958884 107907002 102628907 100818101 100260970 7470703 11417176 101260364 102596278 107802749 107820466 4339462 103635266 123142695 123065078 123182815 8061072 100833565
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