ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT5G13140	Pollen Ole e 1 allergen and extensin family protein
ath-r.7	AT5G13140	Pollen Ole e 1 allergen and extensin family protein
ath-m.9	AT5G13140	Pollen Ole e 1 allergen and extensin family protein
ath-e.2	AT5G13140	Pollen Ole e 1 allergen and extensin family protein
ath-m.4.bio	AT5G13140	Pollen Ole e 1 allergen and extensin family protein
ath-m.4.hor	AT5G13140	Pollen Ole e 1 allergen and extensin family protein
ath-m.4.lig	AT5G13140	Pollen Ole e 1 allergen and extensin family protein
ath-m.4.str	AT5G13140	Pollen Ole e 1 allergen and extensin family protein
ath-m.4.tis	AT5G13140	Pollen Ole e 1 allergen and extensin family protein
ath-u.5	AT3G26960	Pollen Ole e 1 allergen and extensin family protein
ath-u.5	AT5G41050	Pollen Ole e 1 allergen and extensin family protein
bra-r.6	103850845	uncharacterized LOC103850845
bra-r.6	103864049	uncharacterized LOC103864049
bra-r.6	103846599	uncharacterized LOC103846599
bna-r.1	106372322	uncharacterized LOC106372322
bna-r.1	106372393	uncharacterized LOC106372393
bna-r.1	106347472	uncharacterized LOC106347472
ghi-r.1	107948363	uncharacterized LOC107948363
ghi-r.1	107935819	pollen allergen Sal k 5.0101
ghi-r.1	107909538	major pollen allergen Ole e 1
cit-r.1	102620235	hypothetical protein
cit-r.1	102612883	sulfated surface glycoprotein 185
gma-u.5	100800517	actin cytoskeleton-regulatory complex protein PAN1
gma-u.5	100788210	major pollen allergen Ole e 1
gma-u.5	100778270	leucine-rich repeat extensin-like protein 6
vvi-u.5	100265200	pollen-specific protein-like At4g18596
vvi-u.5	100250599	extensin
ppo-u.5	7460569	uncharacterized LOC7460569
ppo-u.5	7495804	major pollen allergen Ole e 1
ppo-u.5	18107240	major pollen allergen Ole e 1
mtr-u.5	11441325	major pollen allergen Ole e 1
mtr-u.5	25499788	uncharacterized LOC25499788
sly-u.5	101262972	pollen allergen Che a 1
sot-r.1	102583450	pollen allergen Che a 1
nta-r.1	107809892	uncharacterized LOC107809892
nta-r.1	107828040	uncharacterized LOC107828040
osa-u.5	4347525	uncharacterized LOC4347525
zma-u.5	100273006	uncharacterized LOC100273006
tae-r.2	123122088	olee1-like protein
tae-r.2	123104320	uncharacterized LOC123104320
tae-r.2	123112597	olee1-like protein
hvu-r.1	123396115	olee1-like protein
sbi-r.1	8054793	uncharacterized LOC8054793
bdi-r.1	100821140	uncharacterized LOC100821140

Top 50 coexpressed genes to AT5G13140 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G13140 (ath-u.5 coexpression data)

CoexMap"831153"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4244 genes)

ISM

GO MF

Protein

NP_196818.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, extr 1, cyto 1, vacu 1

(predict for NP_196818.1)

Subcellular
localization
TargetP

mito 6

(predict for NP_196818.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G13140	ath-r.7 for AT5G13140	ath-m.9 for AT5G13140	ath-e.2 for AT5G13140	ath-m.4.bio for AT5G13140	ath-m.4.hor for AT5G13140	ath-m.4.lig for AT5G13140	ath-m.4.str for AT5G13140	ath-m.4.tis for AT5G13140	ath-u.5 for AT3G26960	ath-u.5 for AT5G41050	bra-r.6 for 103850845	bra-r.6 for 103864049	bra-r.6 for 103846599	bna-r.1 for 106372322	bna-r.1 for 106372393	bna-r.1 for 106347472	ghi-r.1 for 107948363	ghi-r.1 for 107935819	ghi-r.1 for 107909538	cit-r.1 for 102620235	cit-r.1 for 102612883	gma-u.5 for 100800517	gma-u.5 for 100788210	gma-u.5 for 100778270	vvi-u.5 for 100265200	vvi-u.5 for 100250599	ppo-u.5 for 7460569	ppo-u.5 for 7495804	ppo-u.5 for 18107240	mtr-u.5 for 11441325	mtr-u.5 for 25499788	sly-u.5 for 101262972	sot-r.1 for 102583450	nta-r.1 for 107809892	nta-r.1 for 107828040	osa-u.5 for 4347525	zma-u.5 for 100273006	tae-r.2 for 123122088	tae-r.2 for 123104320	tae-r.2 for 123112597	hvu-r.1 for 123396115	sbi-r.1 for 8054793	bdi-r.1 for 100821140

Ortholog

Ortholog ID: 3342

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

Pollen Ole e 1 allergen and extensin family protein

uncharacterized LOC103850845

pollen allergen Che a 1

pollen-specific protein-like At4g18596

uncharacterized LOC106407454

pollen allergen Che a 1-like

uncharacterized LOC106376972

uncharacterized LOC107948363

pollen allergen Sal k 5.0101

major pollen allergen Ole e 1

hypothetical protein

sulfated surface glycoprotein 185

actin cytoskeleton-regulatory complex protein PAN1

leucine-rich repeat extensin-like protein 6

uncharacterized LOC100500029

pollen-specific protein-like At4g18596

extensin

uncharacterized LOC7460569

major pollen allergen Ole e 1

uncharacterized LOC25499788

pollen allergen Che a 1

uncharacterized LOC107809892

uncharacterized LOC107828040

uncharacterized LOC4347525

uncharacterized LOC100273006

olee1-like protein

uncharacterized LOC123104320

olee1-like protein

uncharacterized LOC8054793

uncharacterized LOC100821140

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	3
bna00564	Glycerophospholipid metabolism	3
bna00565	Ether lipid metabolism	3
bna00590	Arachidonic acid metabolism	3
bna00591	Linoleic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00565	Ether lipid metabolism	2
gma00590	Arachidonic acid metabolism	2
gma00591	Linoleic acid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi02010	ABC transporters	2
vvi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo02010	ABC transporters	2
ppo04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	3
mtr04981	Folate transport and metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly02010	ABC transporters	2
sly04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta00511	Other glycan degradation	2
nta00513	Various types of N-glycan biosynthesis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2
nta00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	4
tae04145	Phagosome	2
tae04148	Efferocytosis	2
tae04517	IgSF CAM signaling	2
tae04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00040	Pentose and glucuronate interconversions	2

Expression

Expression pattern

Entrez Gene ID^*

831153

822314

834107

103850845

103836974

103875256

106407454

106391053

106376972

107948363

107935819

107886705

102620235

102612883

100800517

100778270

100500029

100265200

100250599

7460569

7495804

18107240

11441325

25499788

101262972

102583450

107809892

107828040

4347525

100273006

123122088

123104320

123112597

123396115

8054793

100821140

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	11	3	3	3	2	3	2	3	2	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G13140 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G13140 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**